Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
SRP9P49458 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC14.52□□□□□ -0.08
SRP9P49458 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SRP9P49458 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.52□□□□□ -0.08
SRP9P49458 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SRP9P49458 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.52□□□□□ -0.08
SRP9P49458 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
SRP9P49458 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.52□□□□□ -0.08
SRP9P49458 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.52□□□□□ -0.08
SRP9P49458 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SRP9P49458 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.52□□□□□ -0.09
SRP9P49458 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.52□□□□□ -0.09
SRP9P49458 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
SRP9P49458 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.52□□□□□ -0.09
SRP9P49458 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.52□□□□□ -0.09
SRP9P49458 AC098831.1-202ENST00000438821 336 ntBASIC14.52□□□□□ -0.09
SRP9P49458 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SRP9P49458 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC14.52□□□□□ -0.09
SRP9P49458 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SRP9P49458 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC14.52□□□□□ -0.09
SRP9P49458 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.52□□□□□ -0.09
SRP9P49458 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SRP9P49458 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SRP9P49458 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
SRP9P49458 AP005117.1-202ENST00000581724 1908 ntBASIC14.52□□□□□ -0.09
SRP9P49458 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
SRP9P49458 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SRP9P49458 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SRP9P49458 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SRP9P49458 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.52□□□□□ -0.09
SRP9P49458 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SRP9P49458 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SRP9P49458 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
SRP9P49458 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
SRP9P49458 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
SRP9P49458 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SRP9P49458 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SRP9P49458 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.52□□□□□ -0.09
SRP9P49458 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.51□□□□□ -0.09
SRP9P49458 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SRP9P49458 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SRP9P49458 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SRP9P49458 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SRP9P49458 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.51□□□□□ -0.09
SRP9P49458 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.51□□□□□ -0.09
SRP9P49458 AC243591.1-201ENST00000452967 1364 ntBASIC14.51□□□□□ -0.09
SRP9P49458 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.51□□□□□ -0.09
SRP9P49458 TUBB8P12-201ENST00000308911 1335 ntBASIC14.51□□□□□ -0.09
SRP9P49458 TUBB7P-202ENST00000428444 1305 ntBASIC14.51□□□□□ -0.09
SRP9P49458 TUBB8P7-204ENST00000567960 1332 ntBASIC14.51□□□□□ -0.09
SRP9P49458 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SRP9P49458 PPT1-215ENST00000641471 2368 ntBASIC14.51□□□□□ -0.09
SRP9P49458 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SRP9P49458 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
SRP9P49458 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SRP9P49458 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.51□□□□□ -0.09
SRP9P49458 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.51□□□□□ -0.09
SRP9P49458 AL590627.1-203ENST00000421194 1026 ntBASIC14.51□□□□□ -0.09
SRP9P49458 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
SRP9P49458 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.51□□□□□ -0.09
SRP9P49458 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.51□□□□□ -0.09
SRP9P49458 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.51□□□□□ -0.09
SRP9P49458 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.51□□□□□ -0.09
SRP9P49458 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SRP9P49458 TERC-201ENST00000602385 541 ntBASIC14.51□□□□□ -0.09
SRP9P49458 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SRP9P49458 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.51□□□□□ -0.09
SRP9P49458 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.51□□□□□ -0.09
SRP9P49458 AC117500.6-201ENST00000624871 588 ntBASIC14.51□□□□□ -0.09
SRP9P49458 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SRP9P49458 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SRP9P49458 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.51□□□□□ -0.09
SRP9P49458 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SRP9P49458 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SRP9P49458 AC006058.4-201ENST00000624016 1670 ntBASIC14.51□□□□□ -0.09
SRP9P49458 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SRP9P49458 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SRP9P49458 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SRP9P49458 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SRP9P49458 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SRP9P49458 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SRP9P49458 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SRP9P49458 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SRP9P49458 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SRP9P49458 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SRP9P49458 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SRP9P49458 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SRP9P49458 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.5□□□□□ -0.09
SRP9P49458 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.5□□□□□ -0.09
SRP9P49458 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.5□□□□□ -0.09
SRP9P49458 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SRP9P49458 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SRP9P49458 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SRP9P49458 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SRP9P49458 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SRP9P49458 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.5□□□□□ -0.09
SRP9P49458 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.5□□□□□ -0.09
SRP9P49458 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SRP9P49458 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
SRP9P49458 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms