Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 SLC7A3-202ENST00000374299 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PCP4P48539 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
PCP4P48539 EVL-214ENST00000555048 1715 ntTSL 3 BASIC10.94□□□□□ -0.66
PCP4P48539 ACBD5-203ENST00000375901 3685 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PCP4P48539 STXBP5L-201ENST00000273666 9496 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
PCP4P48539 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PCP4P48539 AC093525.7-201ENST00000569852 3626 ntBASIC10.94□□□□□ -0.66
PCP4P48539 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC10.94□□□□□ -0.66
PCP4P48539 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
PCP4P48539 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PCP4P48539 TP53-201ENST00000269305 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PCP4P48539 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
PCP4P48539 TP53-226ENST00000620739 2579 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PCP4P48539 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PCP4P48539 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PCP4P48539 AL592287.1-201ENST00000637598 2074 ntTSL 5 BASIC10.94□□□□□ -0.66
PCP4P48539 AP2A1-201ENST00000354293 3388 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PCP4P48539 AP002761.4-201ENST00000565433 3361 ntBASIC10.94□□□□□ -0.66
PCP4P48539 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PCP4P48539 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PCP4P48539 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
PCP4P48539 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC10.94□□□□□ -0.66
PCP4P48539 RHBDF1P1-201ENST00000427504 1941 ntBASIC10.94□□□□□ -0.66
PCP4P48539 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
PCP4P48539 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
PCP4P48539 BIVM-202ENST00000448849 3198 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
PCP4P48539 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC10.93□□□□□ -0.66
PCP4P48539 SERINC5-202ENST00000507668 6479 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
PCP4P48539 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
PCP4P48539 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
PCP4P48539 COIL-201ENST00000240316 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
PCP4P48539 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
PCP4P48539 SF1-204ENST00000377390 3470 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
PCP4P48539 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
PCP4P48539 REST-208ENST00000619101 7114 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
PCP4P48539 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
PCP4P48539 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
PCP4P48539 KIAA1324-210ENST00000529753 2903 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
PCP4P48539 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
PCP4P48539 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
PCP4P48539 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
PCP4P48539 POTEI-203ENST00000631234 2072 ntTSL 2 BASIC10.93□□□□□ -0.66
PCP4P48539 SLC8A3-207ENST00000528359 2840 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
PCP4P48539 SLC8A3-210ENST00000534137 2837 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
PCP4P48539 PLEKHG5-205ENST00000377740 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
PCP4P48539 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
PCP4P48539 TTYH3-203ENST00000403167 4263 ntTSL 5 BASIC10.93□□□□□ -0.66
PCP4P48539 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC10.93□□□□□ -0.66
PCP4P48539 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC10.93□□□□□ -0.66
PCP4P48539 SRRM5-201ENST00000417606 2381 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
PCP4P48539 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
PCP4P48539 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
PCP4P48539 AC090136.3-201ENST00000520834 2704 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
PCP4P48539 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
PCP4P48539 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
PCP4P48539 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC10.93□□□□□ -0.66
PCP4P48539 UBE2L3-201ENST00000342192 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
PCP4P48539 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
PCP4P48539 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
PCP4P48539 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC10.93□□□□□ -0.66
PCP4P48539 CPLX4-202ENST00000587244 1916 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
PCP4P48539 SEPT6-205ENST00000394610 4694 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
PCP4P48539 MAK16-201ENST00000360128 3991 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
PCP4P48539 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
PCP4P48539 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
PCP4P48539 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
PCP4P48539 IKBKE-203ENST00000581977 3221 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
PCP4P48539 AC015818.8-201ENST00000587907 1519 ntBASIC10.93□□□□□ -0.66
PCP4P48539 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
PCP4P48539 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
PCP4P48539 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
PCP4P48539 CDRT4-204ENST00000619038 2498 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
PCP4P48539 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC10.93□□□□□ -0.66
PCP4P48539 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
PCP4P48539 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
PCP4P48539 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC10.92□□□□□ -0.66
PCP4P48539 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
PCP4P48539 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
PCP4P48539 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
PCP4P48539 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
PCP4P48539 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
PCP4P48539 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
PCP4P48539 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
PCP4P48539 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
PCP4P48539 KIRREL3-201ENST00000525144 3808 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
PCP4P48539 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
PCP4P48539 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
PCP4P48539 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC10.92□□□□□ -0.66
PCP4P48539 TSPEAR-201ENST00000323084 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
PCP4P48539 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
PCP4P48539 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
PCP4P48539 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
PCP4P48539 AC005921.3-201ENST00000623774 2151 ntBASIC10.92□□□□□ -0.66
PCP4P48539 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
PCP4P48539 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
PCP4P48539 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC10.92□□□□□ -0.66
PCP4P48539 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
PCP4P48539 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
PCP4P48539 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC10.92□□□□□ -0.66
PCP4P48539 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms