Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP13P45452 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
MMP13P45452 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
MMP13P45452 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MMP13P45452 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
MMP13P45452 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
MMP13P45452 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
MMP13P45452 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP13P45452 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP13P45452 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
MMP13P45452 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
MMP13P45452 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
MMP13P45452 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.96■□□□□ 0.3
MMP13P45452 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
MMP13P45452 AC092919.2-201ENST00000623631 1645 ntBASIC16.96■□□□□ 0.3
MMP13P45452 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.95■□□□□ 0.3
MMP13P45452 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MMP13P45452 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MMP13P45452 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MMP13P45452 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
MMP13P45452 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MMP13P45452 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MMP13P45452 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MMP13P45452 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.95■□□□□ 0.3
MMP13P45452 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
MMP13P45452 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MMP13P45452 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MMP13P45452 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
MMP13P45452 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.95■□□□□ 0.3
MMP13P45452 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.95■□□□□ 0.3
MMP13P45452 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MMP13P45452 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MMP13P45452 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MMP13P45452 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.95■□□□□ 0.3
MMP13P45452 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.95■□□□□ 0.3
MMP13P45452 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.95■□□□□ 0.3
MMP13P45452 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.95■□□□□ 0.3
MMP13P45452 AL009183.1-201ENST00000603760 355 ntBASIC16.95■□□□□ 0.3
MMP13P45452 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.95■□□□□ 0.3
MMP13P45452 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.95■□□□□ 0.3
MMP13P45452 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.95■□□□□ 0.3
MMP13P45452 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
MMP13P45452 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
MMP13P45452 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
MMP13P45452 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
MMP13P45452 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.95■□□□□ 0.3
MMP13P45452 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
MMP13P45452 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
MMP13P45452 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
MMP13P45452 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
MMP13P45452 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.95■□□□□ 0.3
MMP13P45452 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
MMP13P45452 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
MMP13P45452 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MMP13P45452 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
MMP13P45452 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
MMP13P45452 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
MMP13P45452 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.94■□□□□ 0.3
MMP13P45452 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP13P45452 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP13P45452 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.94■□□□□ 0.3
MMP13P45452 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP13P45452 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.94■□□□□ 0.3
MMP13P45452 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
MMP13P45452 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.94■□□□□ 0.3
MMP13P45452 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP13P45452 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.94■□□□□ 0.3
MMP13P45452 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MMP13P45452 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP13P45452 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP13P45452 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.94■□□□□ 0.3
MMP13P45452 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MMP13P45452 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.94■□□□□ 0.3
MMP13P45452 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MMP13P45452 AC109635.5-201ENST00000533593 962 ntBASIC16.94■□□□□ 0.3
MMP13P45452 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.94■□□□□ 0.3
MMP13P45452 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.94■□□□□ 0.3
MMP13P45452 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.94■□□□□ 0.3
MMP13P45452 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.94■□□□□ 0.3
MMP13P45452 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
MMP13P45452 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP13P45452 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.94■□□□□ 0.3
MMP13P45452 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.94■□□□□ 0.3
MMP13P45452 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
MMP13P45452 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP13P45452 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP13P45452 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MMP13P45452 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP13P45452 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP13P45452 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
MMP13P45452 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP13P45452 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP13P45452 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.94■□□□□ 0.3
MMP13P45452 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP13P45452 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
MMP13P45452 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.94■□□□□ 0.3
MMP13P45452 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
MMP13P45452 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.93■□□□□ 0.3
MMP13P45452 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
MMP13P45452 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms