Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
SLC1A3P43003 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
SLC1A3P43003 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
SLC1A3P43003 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.02■□□□□ -0
SLC1A3P43003 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SLC1A3P43003 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
SLC1A3P43003 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
SLC1A3P43003 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.02■□□□□ -0
SLC1A3P43003 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SLC1A3P43003 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SLC1A3P43003 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.02■□□□□ -0
SLC1A3P43003 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.02■□□□□ -0
SLC1A3P43003 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC15.02■□□□□ -0
SLC1A3P43003 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC15.02■□□□□ -0
SLC1A3P43003 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.02■□□□□ -0
SLC1A3P43003 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
SLC1A3P43003 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
SLC1A3P43003 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.02■□□□□ -0
SLC1A3P43003 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
SLC1A3P43003 AC074386.1-202ENST00000463561 864 ntBASIC15.02■□□□□ -0
SLC1A3P43003 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.02■□□□□ -0
SLC1A3P43003 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
SLC1A3P43003 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.02■□□□□ -0
SLC1A3P43003 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.02■□□□□ -0
SLC1A3P43003 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.02■□□□□ -0
SLC1A3P43003 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
SLC1A3P43003 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.02■□□□□ -0
SLC1A3P43003 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.02■□□□□ -0
SLC1A3P43003 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC1A3P43003 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SLC1A3P43003 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC1A3P43003 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SLC1A3P43003 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC1A3P43003 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC1A3P43003 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC1A3P43003 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC1A3P43003 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.02□□□□□ -0.01
SLC1A3P43003 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC1A3P43003 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.02□□□□□ -0.01
SLC1A3P43003 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC1A3P43003 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC1A3P43003 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC1A3P43003 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SLC1A3P43003 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.02□□□□□ -0.01
SLC1A3P43003 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A3P43003 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A3P43003 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SLC1A3P43003 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC15.01□□□□□ -0.01
SLC1A3P43003 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A3P43003 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A3P43003 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A3P43003 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A3P43003 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
SLC1A3P43003 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A3P43003 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A3P43003 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.01□□□□□ -0.01
SLC1A3P43003 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SLC1A3P43003 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A3P43003 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
SLC1A3P43003 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
SLC1A3P43003 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A3P43003 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A3P43003 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A3P43003 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
SLC1A3P43003 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
SLC1A3P43003 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A3P43003 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A3P43003 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
SLC1A3P43003 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
SLC1A3P43003 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.01□□□□□ -0.01
SLC1A3P43003 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.01□□□□□ -0.01
SLC1A3P43003 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.01□□□□□ -0.01
SLC1A3P43003 AC068137.2-201ENST00000605408 478 ntBASIC15.01□□□□□ -0.01
SLC1A3P43003 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A3P43003 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A3P43003 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A3P43003 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.01□□□□□ -0.01
SLC1A3P43003 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.01□□□□□ -0.01
SLC1A3P43003 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
SLC1A3P43003 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A3P43003 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
SLC1A3P43003 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A3P43003 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A3P43003 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SLC1A3P43003 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.01□□□□□ -0.01
SLC1A3P43003 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
SLC1A3P43003 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A3P43003 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.01□□□□□ -0.01
SLC1A3P43003 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A3P43003 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.01□□□□□ -0.01
SLC1A3P43003 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A3P43003 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A3P43003 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A3P43003 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC15.01□□□□□ -0.01
SLC1A3P43003 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
SLC1A3P43003 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A3P43003 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SLC1A3P43003 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
SLC1A3P43003 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SLC1A3P43003 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms