Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPA3P35244 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RPA3P35244 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RPA3P35244 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPA3P35244 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.51■□□□□ 0.23
RPA3P35244 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPA3P35244 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPA3P35244 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.51■□□□□ 0.23
RPA3P35244 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.51■□□□□ 0.23
RPA3P35244 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.51■□□□□ 0.23
RPA3P35244 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
RPA3P35244 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
RPA3P35244 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RPA3P35244 AC008667.4-201ENST00000607370 168 ntBASIC16.51■□□□□ 0.23
RPA3P35244 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.51■□□□□ 0.23
RPA3P35244 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
RPA3P35244 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.51■□□□□ 0.23
RPA3P35244 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPA3P35244 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPA3P35244 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.51■□□□□ 0.23
RPA3P35244 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPA3P35244 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RPA3P35244 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPA3P35244 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RPA3P35244 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.51■□□□□ 0.23
RPA3P35244 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
RPA3P35244 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RPA3P35244 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.51■□□□□ 0.23
RPA3P35244 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
RPA3P35244 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RPA3P35244 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC16.51■□□□□ 0.23
RPA3P35244 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RPA3P35244 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPA3P35244 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RPA3P35244 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RPA3P35244 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.5■□□□□ 0.23
RPA3P35244 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.5■□□□□ 0.23
RPA3P35244 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.5■□□□□ 0.23
RPA3P35244 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.5■□□□□ 0.23
RPA3P35244 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RPA3P35244 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
RPA3P35244 AC099063.4-201ENST00000641099 1602 ntBASIC16.5■□□□□ 0.23
RPA3P35244 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPA3P35244 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPA3P35244 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPA3P35244 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPA3P35244 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPA3P35244 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.5■□□□□ 0.23
RPA3P35244 PAWRP1-201ENST00000451083 565 ntBASIC16.5■□□□□ 0.23
RPA3P35244 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.5■□□□□ 0.23
RPA3P35244 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.5■□□□□ 0.23
RPA3P35244 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RPA3P35244 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPA3P35244 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RPA3P35244 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.5■□□□□ 0.23
RPA3P35244 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.5■□□□□ 0.23
RPA3P35244 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.5■□□□□ 0.23
RPA3P35244 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPA3P35244 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.5■□□□□ 0.23
RPA3P35244 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.5■□□□□ 0.23
RPA3P35244 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
RPA3P35244 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPA3P35244 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
RPA3P35244 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPA3P35244 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPA3P35244 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
RPA3P35244 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
RPA3P35244 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPA3P35244 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
RPA3P35244 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPA3P35244 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPA3P35244 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RPA3P35244 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPA3P35244 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPA3P35244 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPA3P35244 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RPA3P35244 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPA3P35244 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPA3P35244 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
RPA3P35244 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPA3P35244 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPA3P35244 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPA3P35244 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
RPA3P35244 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.49■□□□□ 0.23
RPA3P35244 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPA3P35244 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.49■□□□□ 0.23
RPA3P35244 AL590627.1-203ENST00000421194 1026 ntBASIC16.49■□□□□ 0.23
RPA3P35244 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
RPA3P35244 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.49■□□□□ 0.23
RPA3P35244 IGHV3-65-201ENST00000523210 341 ntBASIC16.49■□□□□ 0.23
RPA3P35244 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RPA3P35244 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPA3P35244 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.49■□□□□ 0.23
RPA3P35244 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.49■□□□□ 0.23
RPA3P35244 REXO1L3P-201ENST00000622202 1288 ntBASIC16.49■□□□□ 0.23
RPA3P35244 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RPA3P35244 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
RPA3P35244 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
RPA3P35244 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPA3P35244 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms