Protein–RNA interactions for Protein: P25391

LAMA1, Laminin subunit alpha-1, humanhuman

Predictions only

Length 3,075 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA1P25391 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
LAMA1P25391 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LAMA1P25391 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.66■□□□□ 0.1
LAMA1P25391 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
LAMA1P25391 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.66■□□□□ 0.1
LAMA1P25391 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LAMA1P25391 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.66■□□□□ 0.1
LAMA1P25391 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LAMA1P25391 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LAMA1P25391 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
LAMA1P25391 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LAMA1P25391 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LAMA1P25391 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.66■□□□□ 0.1
LAMA1P25391 FOS-206ENST00000555347 1280 ntTSL 2 BASIC15.66■□□□□ 0.1
LAMA1P25391 AC010328.2-201ENST00000597698 1111 ntBASIC15.66■□□□□ 0.1
LAMA1P25391 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LAMA1P25391 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.66■□□□□ 0.1
LAMA1P25391 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
LAMA1P25391 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LAMA1P25391 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LAMA1P25391 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
LAMA1P25391 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.65■□□□□ 0.1
LAMA1P25391 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LAMA1P25391 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LAMA1P25391 BOLA2P3-201ENST00000404566 256 ntBASIC15.65■□□□□ 0.1
LAMA1P25391 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.65■□□□□ 0.1
LAMA1P25391 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.65■□□□□ 0.1
LAMA1P25391 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC15.65■□□□□ 0.1
LAMA1P25391 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LAMA1P25391 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LAMA1P25391 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.65■□□□□ 0.1
LAMA1P25391 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LAMA1P25391 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LAMA1P25391 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.65■□□□□ 0.1
LAMA1P25391 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LAMA1P25391 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
LAMA1P25391 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.65■□□□□ 0.1
LAMA1P25391 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.65■□□□□ 0.1
LAMA1P25391 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
LAMA1P25391 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.65■□□□□ 0.1
LAMA1P25391 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LAMA1P25391 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LAMA1P25391 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LAMA1P25391 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LAMA1P25391 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC15.65■□□□□ 0.1
LAMA1P25391 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.65■□□□□ 0.1
LAMA1P25391 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC15.65■□□□□ 0.1
LAMA1P25391 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LAMA1P25391 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LAMA1P25391 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.65■□□□□ 0.1
LAMA1P25391 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.65■□□□□ 0.1
LAMA1P25391 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.65■□□□□ 0.1
LAMA1P25391 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.65■□□□□ 0.1
LAMA1P25391 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
LAMA1P25391 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LAMA1P25391 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LAMA1P25391 RPS2P36-201ENST00000456516 831 ntBASIC15.64■□□□□ 0.09
LAMA1P25391 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LAMA1P25391 AC124283.3-201ENST00000570869 594 ntBASIC15.64■□□□□ 0.09
LAMA1P25391 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LAMA1P25391 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.64■□□□□ 0.09
LAMA1P25391 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LAMA1P25391 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LAMA1P25391 AC005252.2-201ENST00000624630 1141 ntBASIC15.64■□□□□ 0.09
LAMA1P25391 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LAMA1P25391 AC106886.4-201ENST00000623557 2502 ntBASIC15.64■□□□□ 0.09
LAMA1P25391 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LAMA1P25391 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LAMA1P25391 FLJ38576-201ENST00000623820 2459 ntBASIC15.64■□□□□ 0.09
LAMA1P25391 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LAMA1P25391 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LAMA1P25391 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LAMA1P25391 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LAMA1P25391 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.64■□□□□ 0.09
LAMA1P25391 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LAMA1P25391 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.64■□□□□ 0.09
LAMA1P25391 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LAMA1P25391 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LAMA1P25391 TOMM22P5-201ENST00000416399 439 ntBASIC15.64■□□□□ 0.09
LAMA1P25391 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC15.64■□□□□ 0.09
LAMA1P25391 PFN1P12-201ENST00000455938 534 ntBASIC15.64■□□□□ 0.09
LAMA1P25391 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LAMA1P25391 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.64■□□□□ 0.09
LAMA1P25391 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.64■□□□□ 0.09
LAMA1P25391 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC15.64■□□□□ 0.09
LAMA1P25391 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LAMA1P25391 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
LAMA1P25391 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
LAMA1P25391 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.64■□□□□ 0.09
LAMA1P25391 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.64■□□□□ 0.09
LAMA1P25391 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LAMA1P25391 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
LAMA1P25391 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.64■□□□□ 0.09
LAMA1P25391 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.64■□□□□ 0.09
LAMA1P25391 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.64■□□□□ 0.09
LAMA1P25391 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.64■□□□□ 0.09
LAMA1P25391 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
LAMA1P25391 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LAMA1P25391 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
LAMA1P25391 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms