Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
DEFA4P12838 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DEFA4P12838 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
DEFA4P12838 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DEFA4P12838 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DEFA4P12838 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.32□□□□□ -0.28
DEFA4P12838 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.32□□□□□ -0.28
DEFA4P12838 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DEFA4P12838 MTHFR-217ENST00000641820 1569 ntBASIC13.32□□□□□ -0.28
DEFA4P12838 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
DEFA4P12838 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
DEFA4P12838 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
DEFA4P12838 TOP3BP1-201ENST00000420768 1380 ntBASIC13.32□□□□□ -0.28
DEFA4P12838 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
DEFA4P12838 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
DEFA4P12838 LINC00895-201ENST00000629028 1637 ntBASIC13.31□□□□□ -0.28
DEFA4P12838 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA4P12838 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA4P12838 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC13.31□□□□□ -0.28
DEFA4P12838 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA4P12838 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA4P12838 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA4P12838 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
DEFA4P12838 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC13.31□□□□□ -0.28
DEFA4P12838 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA4P12838 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA4P12838 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
DEFA4P12838 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.31□□□□□ -0.28
DEFA4P12838 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
DEFA4P12838 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.31□□□□□ -0.28
DEFA4P12838 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.31□□□□□ -0.28
DEFA4P12838 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA4P12838 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC13.31□□□□□ -0.28
DEFA4P12838 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA4P12838 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA4P12838 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC13.31□□□□□ -0.28
DEFA4P12838 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
DEFA4P12838 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC13.31□□□□□ -0.28
DEFA4P12838 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA4P12838 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC13.31□□□□□ -0.28
DEFA4P12838 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.31□□□□□ -0.28
DEFA4P12838 AF186996.4-201ENST00000467186 377 ntBASIC13.31□□□□□ -0.28
DEFA4P12838 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA4P12838 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC13.31□□□□□ -0.28
DEFA4P12838 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC13.31□□□□□ -0.28
DEFA4P12838 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC13.31□□□□□ -0.28
DEFA4P12838 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC13.31□□□□□ -0.28
DEFA4P12838 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC13.31□□□□□ -0.28
DEFA4P12838 BMF-207ENST00000559701 630 ntTSL 3 BASIC13.31□□□□□ -0.28
DEFA4P12838 GGTLC5P-201ENST00000617623 998 ntBASIC13.31□□□□□ -0.28
DEFA4P12838 AC107918.4-202ENST00000641623 219 ntBASIC13.31□□□□□ -0.28
DEFA4P12838 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
DEFA4P12838 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA4P12838 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA4P12838 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA4P12838 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA4P12838 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA4P12838 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC13.31□□□□□ -0.28
DEFA4P12838 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC13.31□□□□□ -0.28
DEFA4P12838 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.31□□□□□ -0.28
DEFA4P12838 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA4P12838 AC138969.2-201ENST00000532739 9932 ntBASIC13.31□□□□□ -0.28
DEFA4P12838 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.31□□□□□ -0.28
DEFA4P12838 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA4P12838 LINC02228-204ENST00000642115 2962 ntBASIC13.31□□□□□ -0.28
DEFA4P12838 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA4P12838 MYO15B-237ENST00000642007 4893 ntBASIC13.31□□□□□ -0.28
DEFA4P12838 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA4P12838 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA4P12838 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
DEFA4P12838 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA4P12838 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
DEFA4P12838 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.31□□□□□ -0.28
DEFA4P12838 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.3□□□□□ -0.28
DEFA4P12838 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA4P12838 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
DEFA4P12838 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA4P12838 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA4P12838 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA4P12838 AC073347.1-201ENST00000421633 2643 ntBASIC13.3□□□□□ -0.28
DEFA4P12838 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
DEFA4P12838 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC13.3□□□□□ -0.28
DEFA4P12838 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA4P12838 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA4P12838 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA4P12838 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.3□□□□□ -0.28
DEFA4P12838 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA4P12838 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA4P12838 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.3□□□□□ -0.28
DEFA4P12838 SBF1P1-201ENST00000444527 5631 ntBASIC13.3□□□□□ -0.28
DEFA4P12838 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA4P12838 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
DEFA4P12838 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA4P12838 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.3□□□□□ -0.28
DEFA4P12838 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA4P12838 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA4P12838 AKR1C7P-201ENST00000305623 895 ntBASIC13.3□□□□□ -0.28
DEFA4P12838 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
DEFA4P12838 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.3□□□□□ -0.28
DEFA4P12838 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms