Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 AL592424.1-201ENST00000563624 1536 ntBASIC17.11■□□□□ 0.33
RARAP10276 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RARAP10276 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RARAP10276 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
RARAP10276 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.11■□□□□ 0.33
RARAP10276 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RARAP10276 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RARAP10276 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.11■□□□□ 0.33
RARAP10276 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RARAP10276 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RARAP10276 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC17.11■□□□□ 0.33
RARAP10276 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RARAP10276 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RARAP10276 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RARAP10276 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RARAP10276 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RARAP10276 AL591424.1-201ENST00000442569 1213 ntBASIC17.11■□□□□ 0.33
RARAP10276 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RARAP10276 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.11■□□□□ 0.33
RARAP10276 AL078644.1-201ENST00000609881 752 ntBASIC17.11■□□□□ 0.33
RARAP10276 FAM197Y3-203ENST00000618346 717 ntBASIC17.11■□□□□ 0.33
RARAP10276 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.11■□□□□ 0.33
RARAP10276 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RARAP10276 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RARAP10276 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
RARAP10276 LINC02228-204ENST00000642115 2962 ntBASIC17.11■□□□□ 0.33
RARAP10276 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RARAP10276 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RARAP10276 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
RARAP10276 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
RARAP10276 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RARAP10276 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.11■□□□□ 0.33
RARAP10276 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
RARAP10276 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RARAP10276 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.1■□□□□ 0.33
RARAP10276 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RARAP10276 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RARAP10276 AC016027.1-202ENST00000607927 1699 ntBASIC17.1■□□□□ 0.33
RARAP10276 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RARAP10276 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.1■□□□□ 0.33
RARAP10276 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RARAP10276 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RARAP10276 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RARAP10276 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RARAP10276 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RARAP10276 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RARAP10276 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RARAP10276 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.1■□□□□ 0.33
RARAP10276 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RARAP10276 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RARAP10276 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.1■□□□□ 0.33
RARAP10276 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.1■□□□□ 0.33
RARAP10276 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RARAP10276 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC17.1■□□□□ 0.33
RARAP10276 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.1■□□□□ 0.33
RARAP10276 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC17.1■□□□□ 0.33
RARAP10276 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.1■□□□□ 0.33
RARAP10276 AP002472.1-201ENST00000577490 586 ntBASIC17.1■□□□□ 0.33
RARAP10276 AC068137.2-201ENST00000605408 478 ntBASIC17.1■□□□□ 0.33
RARAP10276 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.1■□□□□ 0.33
RARAP10276 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RARAP10276 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.1■□□□□ 0.33
RARAP10276 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
RARAP10276 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
RARAP10276 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.1■□□□□ 0.33
RARAP10276 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RARAP10276 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.1■□□□□ 0.33
RARAP10276 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.1■□□□□ 0.33
RARAP10276 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.1■□□□□ 0.33
RARAP10276 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.1■□□□□ 0.33
RARAP10276 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RARAP10276 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RARAP10276 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RARAP10276 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RARAP10276 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RARAP10276 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
RARAP10276 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RARAP10276 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.09■□□□□ 0.33
RARAP10276 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.09■□□□□ 0.33
RARAP10276 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.09■□□□□ 0.33
RARAP10276 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RARAP10276 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.09■□□□□ 0.33
RARAP10276 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RARAP10276 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RARAP10276 MIR648-201ENST00000385046 94 ntBASIC17.09■□□□□ 0.33
RARAP10276 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.09■□□□□ 0.33
RARAP10276 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
RARAP10276 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
RARAP10276 KRT18P34-201ENST00000488218 1270 ntBASIC17.09■□□□□ 0.33
RARAP10276 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.09■□□□□ 0.33
RARAP10276 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.09■□□□□ 0.33
RARAP10276 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.09■□□□□ 0.33
RARAP10276 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.09■□□□□ 0.33
RARAP10276 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.09■□□□□ 0.33
RARAP10276 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RARAP10276 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
RARAP10276 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC17.09■□□□□ 0.33
RARAP10276 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RARAP10276 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
RARAP10276 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms