Protein–RNA interactions for Protein: P0DP04

IGHV3-43D, Immunoglobulin heavy variable 3-43D, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-43DP0DP04 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
IGHV3-43DP0DP04 MIR600HG-201ENST00000449175 5984 ntBASIC13.58□□□□□ -0.23
IGHV3-43DP0DP04 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
IGHV3-43DP0DP04 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.58□□□□□ -0.23
IGHV3-43DP0DP04 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
IGHV3-43DP0DP04 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
IGHV3-43DP0DP04 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.58□□□□□ -0.24
IGHV3-43DP0DP04 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
IGHV3-43DP0DP04 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
IGHV3-43DP0DP04 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
IGHV3-43DP0DP04 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
IGHV3-43DP0DP04 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
IGHV3-43DP0DP04 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
IGHV3-43DP0DP04 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
IGHV3-43DP0DP04 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
IGHV3-43DP0DP04 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.58□□□□□ -0.24
IGHV3-43DP0DP04 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.58□□□□□ -0.24
IGHV3-43DP0DP04 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC13.58□□□□□ -0.24
IGHV3-43DP0DP04 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.58□□□□□ -0.24
IGHV3-43DP0DP04 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.58□□□□□ -0.24
IGHV3-43DP0DP04 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.58□□□□□ -0.24
IGHV3-43DP0DP04 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.58□□□□□ -0.24
IGHV3-43DP0DP04 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
IGHV3-43DP0DP04 AC004877.2-201ENST00000623941 599 ntBASIC13.58□□□□□ -0.24
IGHV3-43DP0DP04 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
IGHV3-43DP0DP04 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
IGHV3-43DP0DP04 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
IGHV3-43DP0DP04 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
IGHV3-43DP0DP04 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
IGHV3-43DP0DP04 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
IGHV3-43DP0DP04 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
IGHV3-43DP0DP04 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC13.58□□□□□ -0.24
IGHV3-43DP0DP04 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
IGHV3-43DP0DP04 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
IGHV3-43DP0DP04 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
IGHV3-43DP0DP04 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.58□□□□□ -0.24
IGHV3-43DP0DP04 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
IGHV3-43DP0DP04 IL9RP2-201ENST00000423948 1312 ntBASIC13.58□□□□□ -0.24
IGHV3-43DP0DP04 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
IGHV3-43DP0DP04 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
IGHV3-43DP0DP04 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
IGHV3-43DP0DP04 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
IGHV3-43DP0DP04 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
IGHV3-43DP0DP04 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.58□□□□□ -0.24
IGHV3-43DP0DP04 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
IGHV3-43DP0DP04 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
IGHV3-43DP0DP04 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 AL365203.3-201ENST00000609742 2057 ntBASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 AC025580.3-201ENST00000617932 1424 ntBASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 PMS2P4-201ENST00000412466 1052 ntBASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 AL590627.1-203ENST00000421194 1026 ntBASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 RHOQP3-201ENST00000437982 621 ntBASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 KRT18P2-201ENST00000447938 1258 ntBASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 AQP6-205ENST00000618286 829 ntTSL 5 BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 AL139384.1-201ENST00000612143 3047 ntBASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
IGHV3-43DP0DP04 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms