Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HTR1AP08908 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.91□□□□□ -0.02
HTR1AP08908 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HTR1AP08908 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
HTR1AP08908 AC005912.2-201ENST00000619492 2400 ntBASIC14.91□□□□□ -0.02
HTR1AP08908 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.91□□□□□ -0.02
HTR1AP08908 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
HTR1AP08908 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HTR1AP08908 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
HTR1AP08908 AC008677.1-201ENST00000519230 1561 ntBASIC14.9□□□□□ -0.02
HTR1AP08908 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HTR1AP08908 INTS4P1-201ENST00000438455 1935 ntBASIC14.9□□□□□ -0.02
HTR1AP08908 MED25-212ENST00000618715 1467 ntTSL 5 BASIC14.9□□□□□ -0.02
HTR1AP08908 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
HTR1AP08908 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
HTR1AP08908 TOP3BP1-201ENST00000420768 1380 ntBASIC14.9□□□□□ -0.02
HTR1AP08908 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
HTR1AP08908 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HTR1AP08908 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HTR1AP08908 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HTR1AP08908 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.9□□□□□ -0.02
HTR1AP08908 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.9□□□□□ -0.02
HTR1AP08908 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
HTR1AP08908 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC14.9□□□□□ -0.02
HTR1AP08908 MINOS1P3-201ENST00000457048 203 ntBASIC14.9□□□□□ -0.02
HTR1AP08908 PPOX-219ENST00000544598 813 ntTSL 2 BASIC14.9□□□□□ -0.02
HTR1AP08908 COX5A-202ENST00000562233 441 ntTSL 3 BASIC14.9□□□□□ -0.02
HTR1AP08908 COX5A-204ENST00000567270 579 ntTSL 3 BASIC14.9□□□□□ -0.02
HTR1AP08908 Z69720.1-201ENST00000601483 472 ntBASIC14.9□□□□□ -0.02
HTR1AP08908 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HTR1AP08908 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
HTR1AP08908 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.9□□□□□ -0.02
HTR1AP08908 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HTR1AP08908 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HTR1AP08908 AC087481.3-201ENST00000602886 1894 ntBASIC14.9□□□□□ -0.02
HTR1AP08908 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HTR1AP08908 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HTR1AP08908 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HTR1AP08908 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HTR1AP08908 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HTR1AP08908 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HTR1AP08908 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HTR1AP08908 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.9□□□□□ -0.02
HTR1AP08908 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HTR1AP08908 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
HTR1AP08908 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.9□□□□□ -0.02
HTR1AP08908 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.9□□□□□ -0.02
HTR1AP08908 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
HTR1AP08908 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
HTR1AP08908 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.9□□□□□ -0.02
HTR1AP08908 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HTR1AP08908 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
HTR1AP08908 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HTR1AP08908 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HTR1AP08908 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HTR1AP08908 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HTR1AP08908 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HTR1AP08908 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HTR1AP08908 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HTR1AP08908 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HTR1AP08908 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HTR1AP08908 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
HTR1AP08908 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HTR1AP08908 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.89□□□□□ -0.03
HTR1AP08908 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HTR1AP08908 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
HTR1AP08908 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HTR1AP08908 AC211429.1-201ENST00000415277 523 ntBASIC14.89□□□□□ -0.03
HTR1AP08908 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC14.89□□□□□ -0.03
HTR1AP08908 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC14.89□□□□□ -0.03
HTR1AP08908 DUX4L26-201ENST00000489078 1255 ntBASIC14.89□□□□□ -0.03
HTR1AP08908 AC096582.2-201ENST00000510860 516 ntBASIC14.89□□□□□ -0.03
HTR1AP08908 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC14.89□□□□□ -0.03
HTR1AP08908 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC14.89□□□□□ -0.03
HTR1AP08908 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14.89□□□□□ -0.03
HTR1AP08908 LTBR-211ENST00000543190 785 ntTSL 3 BASIC14.89□□□□□ -0.03
HTR1AP08908 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC14.89□□□□□ -0.03
HTR1AP08908 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.89□□□□□ -0.03
HTR1AP08908 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.89□□□□□ -0.03
HTR1AP08908 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HTR1AP08908 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.89□□□□□ -0.03
HTR1AP08908 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
HTR1AP08908 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HTR1AP08908 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HTR1AP08908 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
HTR1AP08908 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HTR1AP08908 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
HTR1AP08908 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HTR1AP08908 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.89□□□□□ -0.03
HTR1AP08908 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.89□□□□□ -0.03
HTR1AP08908 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HTR1AP08908 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.89□□□□□ -0.03
HTR1AP08908 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HTR1AP08908 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HTR1AP08908 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.89□□□□□ -0.03
HTR1AP08908 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
HTR1AP08908 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HTR1AP08908 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HTR1AP08908 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HTR1AP08908 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms