Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.39■□□□□ 0.21
RETP07949 MEP1AP4-201ENST00000423244 1087 ntBASIC16.39■□□□□ 0.21
RETP07949 AC119751.2-201ENST00000504529 210 ntBASIC16.39■□□□□ 0.21
RETP07949 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.39■□□□□ 0.21
RETP07949 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.39■□□□□ 0.21
RETP07949 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RETP07949 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.39■□□□□ 0.21
RETP07949 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC16.39■□□□□ 0.21
RETP07949 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC16.39■□□□□ 0.21
RETP07949 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RETP07949 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC16.39■□□□□ 0.21
RETP07949 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.39■□□□□ 0.21
RETP07949 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RETP07949 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RETP07949 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RETP07949 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RETP07949 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.39■□□□□ 0.21
RETP07949 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RETP07949 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.39■□□□□ 0.21
RETP07949 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
RETP07949 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RETP07949 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RETP07949 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RETP07949 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.39■□□□□ 0.21
RETP07949 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.39■□□□□ 0.21
RETP07949 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RETP07949 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
RETP07949 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
RETP07949 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RETP07949 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RETP07949 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RETP07949 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
RETP07949 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RETP07949 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RETP07949 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RETP07949 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RETP07949 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RETP07949 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
RETP07949 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RETP07949 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RETP07949 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.38■□□□□ 0.21
RETP07949 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RETP07949 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.38■□□□□ 0.21
RETP07949 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RETP07949 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RETP07949 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RETP07949 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.38■□□□□ 0.21
RETP07949 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.38■□□□□ 0.21
RETP07949 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC16.38■□□□□ 0.21
RETP07949 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RETP07949 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.38■□□□□ 0.21
RETP07949 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.38■□□□□ 0.21
RETP07949 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
RETP07949 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.38■□□□□ 0.21
RETP07949 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
RETP07949 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.38■□□□□ 0.21
RETP07949 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.38■□□□□ 0.21
RETP07949 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RETP07949 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.38■□□□□ 0.21
RETP07949 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RETP07949 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RETP07949 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RETP07949 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.38■□□□□ 0.21
RETP07949 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.38■□□□□ 0.21
RETP07949 FOXO1B-201ENST00000504678 1527 ntBASIC16.38■□□□□ 0.21
RETP07949 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.38■□□□□ 0.21
RETP07949 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.38■□□□□ 0.21
RETP07949 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.38■□□□□ 0.21
RETP07949 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC16.37■□□□□ 0.21
RETP07949 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.37■□□□□ 0.21
RETP07949 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.37■□□□□ 0.21
RETP07949 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.37■□□□□ 0.21
RETP07949 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RETP07949 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.37■□□□□ 0.21
RETP07949 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RETP07949 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.37■□□□□ 0.21
RETP07949 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.37■□□□□ 0.21
RETP07949 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.37■□□□□ 0.21
RETP07949 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RETP07949 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.37■□□□□ 0.21
RETP07949 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.37■□□□□ 0.21
RETP07949 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RETP07949 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RETP07949 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.37■□□□□ 0.21
RETP07949 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
RETP07949 BOLA2P3-201ENST00000404566 256 ntBASIC16.37■□□□□ 0.21
RETP07949 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.37■□□□□ 0.21
RETP07949 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.37■□□□□ 0.21
RETP07949 MYCLP2-201ENST00000449268 967 ntBASIC16.37■□□□□ 0.21
RETP07949 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
RETP07949 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.37■□□□□ 0.21
RETP07949 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.37■□□□□ 0.21
RETP07949 MPDU1-223ENST00000582151 728 ntBASIC16.37■□□□□ 0.21
RETP07949 AL133215.2-201ENST00000609242 977 ntBASIC16.37■□□□□ 0.21
RETP07949 AC068587.10-201ENST00000641210 219 ntBASIC16.37■□□□□ 0.21
RETP07949 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.37■□□□□ 0.21
RETP07949 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RETP07949 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
RETP07949 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
RETP07949 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms