Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RB1P06400 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.07■□□□□ 0.32
RB1P06400 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.07■□□□□ 0.32
RB1P06400 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC17.07■□□□□ 0.32
RB1P06400 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RB1P06400 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RB1P06400 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
RB1P06400 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.07■□□□□ 0.32
RB1P06400 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RB1P06400 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RB1P06400 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RB1P06400 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
RB1P06400 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RB1P06400 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RB1P06400 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.07■□□□□ 0.32
RB1P06400 PCDHB18P-201ENST00000524813 2368 ntBASIC17.07■□□□□ 0.32
RB1P06400 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RB1P06400 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.07■□□□□ 0.32
RB1P06400 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RB1P06400 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
RB1P06400 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RB1P06400 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RB1P06400 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
RB1P06400 AL691432.1-201ENST00000596308 1422 ntBASIC17.06■□□□□ 0.32
RB1P06400 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RB1P06400 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RB1P06400 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RB1P06400 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RB1P06400 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RB1P06400 AC134915.1-201ENST00000426461 574 ntBASIC17.06■□□□□ 0.32
RB1P06400 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.06■□□□□ 0.32
RB1P06400 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RB1P06400 AP001889.1-201ENST00000525414 633 ntBASIC17.06■□□□□ 0.32
RB1P06400 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC17.06■□□□□ 0.32
RB1P06400 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC17.06■□□□□ 0.32
RB1P06400 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.06■□□□□ 0.32
RB1P06400 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
RB1P06400 AC079316.1-201ENST00000548397 411 ntBASIC17.06■□□□□ 0.32
RB1P06400 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC17.06■□□□□ 0.32
RB1P06400 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC17.06■□□□□ 0.32
RB1P06400 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC17.06■□□□□ 0.32
RB1P06400 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.06■□□□□ 0.32
RB1P06400 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC17.06■□□□□ 0.32
RB1P06400 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RB1P06400 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RB1P06400 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RB1P06400 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RB1P06400 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.06■□□□□ 0.32
RB1P06400 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.06■□□□□ 0.32
RB1P06400 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
RB1P06400 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.06■□□□□ 0.32
RB1P06400 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RB1P06400 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RB1P06400 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RB1P06400 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.05■□□□□ 0.32
RB1P06400 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RB1P06400 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RB1P06400 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RB1P06400 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RB1P06400 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RB1P06400 PKD1P1-201ENST00000458669 6805 ntBASIC17.05■□□□□ 0.32
RB1P06400 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.05■□□□□ 0.32
RB1P06400 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RB1P06400 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RB1P06400 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RB1P06400 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RB1P06400 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RB1P06400 RPL28-203ENST00000428193 573 ntTSL 2 BASIC17.05■□□□□ 0.32
RB1P06400 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC17.05■□□□□ 0.32
RB1P06400 AL355864.2-201ENST00000447420 863 ntBASIC17.05■□□□□ 0.32
RB1P06400 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17.05■□□□□ 0.32
RB1P06400 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.05■□□□□ 0.32
RB1P06400 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
RB1P06400 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC17.05■□□□□ 0.32
RB1P06400 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.05■□□□□ 0.32
RB1P06400 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RB1P06400 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.05■□□□□ 0.32
RB1P06400 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RB1P06400 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC17.05■□□□□ 0.32
RB1P06400 RPL28-207ENST00000558815 616 ntTSL 2 BASIC17.05■□□□□ 0.32
RB1P06400 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.05■□□□□ 0.32
RB1P06400 AC009486.1-201ENST00000569860 813 ntBASIC17.05■□□□□ 0.32
RB1P06400 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.05■□□□□ 0.32
RB1P06400 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RB1P06400 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
RB1P06400 AC244093.1-201ENST00000610837 814 ntBASIC17.05■□□□□ 0.32
RB1P06400 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC17.05■□□□□ 0.32
RB1P06400 AC068587.10-201ENST00000641210 219 ntBASIC17.05■□□□□ 0.32
RB1P06400 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RB1P06400 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.05■□□□□ 0.32
RB1P06400 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.05■□□□□ 0.32
RB1P06400 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RB1P06400 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.05■□□□□ 0.32
RB1P06400 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.05■□□□□ 0.32
RB1P06400 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
RB1P06400 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
RB1P06400 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RB1P06400 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RB1P06400 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RB1P06400 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms