Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
HLA-DQB2P05538 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
HLA-DQB2P05538 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.49■□□□□ 0.23
HLA-DQB2P05538 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DQB2P05538 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.49■□□□□ 0.23
HLA-DQB2P05538 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.49■□□□□ 0.23
HLA-DQB2P05538 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DQB2P05538 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DQB2P05538 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HLA-DQB2P05538 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DQB2P05538 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DQB2P05538 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DQB2P05538 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DQB2P05538 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DQB2P05538 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DQB2P05538 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.48■□□□□ 0.23
HLA-DQB2P05538 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
HLA-DQB2P05538 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.48■□□□□ 0.23
HLA-DQB2P05538 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
HLA-DQB2P05538 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
HLA-DQB2P05538 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
HLA-DQB2P05538 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DQB2P05538 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DQB2P05538 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
HLA-DQB2P05538 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DQB2P05538 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
HLA-DQB2P05538 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DQB2P05538 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DQB2P05538 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.48■□□□□ 0.23
HLA-DQB2P05538 CNN2P11-201ENST00000429351 262 ntBASIC16.48■□□□□ 0.23
HLA-DQB2P05538 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.48■□□□□ 0.23
HLA-DQB2P05538 AC023141.5-201ENST00000458585 616 ntBASIC16.48■□□□□ 0.23
HLA-DQB2P05538 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
HLA-DQB2P05538 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.48■□□□□ 0.23
HLA-DQB2P05538 AC024267.1-201ENST00000582320 895 ntBASIC16.48■□□□□ 0.23
HLA-DQB2P05538 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.48■□□□□ 0.23
HLA-DQB2P05538 AL596442.2-201ENST00000610240 980 ntBASIC16.48■□□□□ 0.23
HLA-DQB2P05538 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.48■□□□□ 0.23
HLA-DQB2P05538 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.48■□□□□ 0.23
HLA-DQB2P05538 AC008894.3-201ENST00000624324 3103 ntBASIC16.48■□□□□ 0.23
HLA-DQB2P05538 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DQB2P05538 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DQB2P05538 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DQB2P05538 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
HLA-DQB2P05538 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
HLA-DQB2P05538 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
HLA-DQB2P05538 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.48■□□□□ 0.23
HLA-DQB2P05538 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.48■□□□□ 0.23
HLA-DQB2P05538 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DQB2P05538 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DQB2P05538 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DQB2P05538 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.48■□□□□ 0.23
HLA-DQB2P05538 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DQB2P05538 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
HLA-DQB2P05538 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
HLA-DQB2P05538 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
HLA-DQB2P05538 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HLA-DQB2P05538 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DQB2P05538 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DQB2P05538 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DQB2P05538 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.47■□□□□ 0.23
HLA-DQB2P05538 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.47■□□□□ 0.23
HLA-DQB2P05538 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.47■□□□□ 0.23
HLA-DQB2P05538 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.47■□□□□ 0.23
HLA-DQB2P05538 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DQB2P05538 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DQB2P05538 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DQB2P05538 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.47■□□□□ 0.23
HLA-DQB2P05538 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
HLA-DQB2P05538 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DQB2P05538 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DQB2P05538 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DQB2P05538 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.47■□□□□ 0.23
HLA-DQB2P05538 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.47■□□□□ 0.23
HLA-DQB2P05538 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.47■□□□□ 0.23
HLA-DQB2P05538 DNAJB3-202ENST00000449667 1266 ntBASIC16.47■□□□□ 0.23
HLA-DQB2P05538 RARRES2P9-201ENST00000565168 469 ntBASIC16.47■□□□□ 0.23
HLA-DQB2P05538 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DQB2P05538 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.47■□□□□ 0.23
HLA-DQB2P05538 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.47■□□□□ 0.23
HLA-DQB2P05538 AC027612.4-201ENST00000605371 583 ntBASIC16.47■□□□□ 0.23
HLA-DQB2P05538 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.47■□□□□ 0.23
HLA-DQB2P05538 AC009093.7-201ENST00000623853 1223 ntBASIC16.47■□□□□ 0.23
HLA-DQB2P05538 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.47■□□□□ 0.23
HLA-DQB2P05538 GOLGA6L17P-202ENST00000614358 1398 ntBASIC16.47■□□□□ 0.23
HLA-DQB2P05538 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DQB2P05538 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DQB2P05538 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DQB2P05538 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
HLA-DQB2P05538 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
HLA-DQB2P05538 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HLA-DQB2P05538 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.47■□□□□ 0.23
HLA-DQB2P05538 AC112504.1-201ENST00000623415 1841 ntBASIC16.47■□□□□ 0.23
HLA-DQB2P05538 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HLA-DQB2P05538 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms