Protein–RNA interactions for Protein: P04180

LCAT, Phosphatidylcholine-sterol acyltransferase, humanhuman

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCATP04180 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCATP04180 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
LCATP04180 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCATP04180 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LCATP04180 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
LCATP04180 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCATP04180 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.3□□□□□ -0.12
LCATP04180 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LCATP04180 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.3□□□□□ -0.12
LCATP04180 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCATP04180 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCATP04180 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCATP04180 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
LCATP04180 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCATP04180 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.3□□□□□ -0.12
LCATP04180 AC074386.1-202ENST00000463561 864 ntBASIC14.3□□□□□ -0.12
LCATP04180 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.3□□□□□ -0.12
LCATP04180 AC109635.5-201ENST00000533593 962 ntBASIC14.3□□□□□ -0.12
LCATP04180 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
LCATP04180 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.3□□□□□ -0.12
LCATP04180 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.3□□□□□ -0.12
LCATP04180 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.3□□□□□ -0.12
LCATP04180 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.3□□□□□ -0.12
LCATP04180 AC140113.2-201ENST00000604370 208 ntBASIC14.3□□□□□ -0.12
LCATP04180 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.3□□□□□ -0.12
LCATP04180 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.3□□□□□ -0.12
LCATP04180 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.3□□□□□ -0.12
LCATP04180 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCATP04180 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
LCATP04180 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.3□□□□□ -0.12
LCATP04180 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LCATP04180 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCATP04180 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
LCATP04180 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
LCATP04180 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LCATP04180 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCATP04180 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.3□□□□□ -0.12
LCATP04180 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCATP04180 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCATP04180 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LCATP04180 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.3□□□□□ -0.12
LCATP04180 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.3□□□□□ -0.12
LCATP04180 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC14.3□□□□□ -0.12
LCATP04180 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LCATP04180 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LCATP04180 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCATP04180 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LCATP04180 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCATP04180 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
LCATP04180 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
LCATP04180 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCATP04180 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
LCATP04180 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.29□□□□□ -0.12
LCATP04180 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCATP04180 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
LCATP04180 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCATP04180 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCATP04180 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LCATP04180 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.29□□□□□ -0.12
LCATP04180 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.29□□□□□ -0.12
LCATP04180 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCATP04180 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCATP04180 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCATP04180 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCATP04180 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LCATP04180 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCATP04180 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LCATP04180 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
LCATP04180 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LCATP04180 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.29□□□□□ -0.12
LCATP04180 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
LCATP04180 AC092474.2-201ENST00000424288 719 ntBASIC14.29□□□□□ -0.12
LCATP04180 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LCATP04180 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LCATP04180 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.29□□□□□ -0.12
LCATP04180 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.29□□□□□ -0.12
LCATP04180 AC068137.2-201ENST00000605408 478 ntBASIC14.29□□□□□ -0.12
LCATP04180 NME4-212ENST00000621774 904 ntTSL 3 BASIC14.29□□□□□ -0.12
LCATP04180 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.29□□□□□ -0.12
LCATP04180 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.29□□□□□ -0.12
LCATP04180 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LCATP04180 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.29□□□□□ -0.12
LCATP04180 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.29□□□□□ -0.12
LCATP04180 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCATP04180 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCATP04180 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LCATP04180 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.29□□□□□ -0.12
LCATP04180 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LCATP04180 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCATP04180 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCATP04180 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LCATP04180 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
LCATP04180 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
LCATP04180 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCATP04180 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.29□□□□□ -0.12
LCATP04180 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCATP04180 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LCATP04180 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
LCATP04180 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
LCATP04180 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms