Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.75■□□□□ 0.43
VTNP04004 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VTNP04004 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VTNP04004 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
VTNP04004 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
VTNP04004 ME2P1-201ENST00000426028 1970 ntBASIC17.75■□□□□ 0.43
VTNP04004 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
VTNP04004 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.74■□□□□ 0.43
VTNP04004 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VTNP04004 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VTNP04004 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VTNP04004 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VTNP04004 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.74■□□□□ 0.43
VTNP04004 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VTNP04004 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.74■□□□□ 0.43
VTNP04004 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VTNP04004 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.74■□□□□ 0.43
VTNP04004 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
VTNP04004 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
VTNP04004 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
VTNP04004 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VTNP04004 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.74■□□□□ 0.43
VTNP04004 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VTNP04004 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC17.74■□□□□ 0.43
VTNP04004 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VTNP04004 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VTNP04004 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VTNP04004 HIST3H2BA-201ENST00000436555 524 ntBASIC17.74■□□□□ 0.43
VTNP04004 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.74■□□□□ 0.43
VTNP04004 AL589987.1-201ENST00000453380 819 ntBASIC17.74■□□□□ 0.43
VTNP04004 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
VTNP04004 TP53TG3HP-202ENST00000569755 579 ntBASIC17.74■□□□□ 0.43
VTNP04004 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VTNP04004 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VTNP04004 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.74■□□□□ 0.43
VTNP04004 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VTNP04004 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.74■□□□□ 0.43
VTNP04004 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
VTNP04004 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
VTNP04004 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VTNP04004 PCDHA12-202ENST00000613593 2588 ntBASIC17.74■□□□□ 0.43
VTNP04004 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.73■□□□□ 0.43
VTNP04004 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
VTNP04004 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VTNP04004 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VTNP04004 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
VTNP04004 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VTNP04004 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.73■□□□□ 0.43
VTNP04004 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VTNP04004 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VTNP04004 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VTNP04004 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
VTNP04004 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
VTNP04004 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VTNP04004 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.73■□□□□ 0.43
VTNP04004 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.73■□□□□ 0.43
VTNP04004 AL353779.1-201ENST00000434793 351 ntBASIC17.73■□□□□ 0.43
VTNP04004 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC17.73■□□□□ 0.43
VTNP04004 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
VTNP04004 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.73■□□□□ 0.43
VTNP04004 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.73■□□□□ 0.43
VTNP04004 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
VTNP04004 SRD5A3P1-201ENST00000603021 949 ntBASIC17.73■□□□□ 0.43
VTNP04004 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
VTNP04004 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.73■□□□□ 0.43
VTNP04004 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VTNP04004 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
VTNP04004 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.73■□□□□ 0.43
VTNP04004 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
VTNP04004 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
VTNP04004 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VTNP04004 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
VTNP04004 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.73■□□□□ 0.43
VTNP04004 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
VTNP04004 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
VTNP04004 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VTNP04004 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.73■□□□□ 0.43
VTNP04004 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
VTNP04004 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
VTNP04004 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VTNP04004 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.72■□□□□ 0.43
VTNP04004 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
VTNP04004 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VTNP04004 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VTNP04004 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VTNP04004 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VTNP04004 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.72■□□□□ 0.43
VTNP04004 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
VTNP04004 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.72■□□□□ 0.43
VTNP04004 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VTNP04004 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.72■□□□□ 0.43
VTNP04004 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
VTNP04004 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.72■□□□□ 0.43
VTNP04004 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VTNP04004 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.72■□□□□ 0.43
VTNP04004 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC17.72■□□□□ 0.43
VTNP04004 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.72■□□□□ 0.43
VTNP04004 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.72■□□□□ 0.43
VTNP04004 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VTNP04004 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms