Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
MBD4O95243 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC19.35■□□□□ 0.69
MBD4O95243 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
MBD4O95243 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC19.35■□□□□ 0.69
MBD4O95243 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MBD4O95243 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MBD4O95243 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
MBD4O95243 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
MBD4O95243 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MBD4O95243 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MBD4O95243 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
MBD4O95243 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MBD4O95243 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MBD4O95243 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MBD4O95243 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
MBD4O95243 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
MBD4O95243 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MBD4O95243 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MBD4O95243 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MBD4O95243 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MBD4O95243 SPDYE17-201ENST00000412399 783 ntBASIC19.34■□□□□ 0.69
MBD4O95243 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MBD4O95243 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.34■□□□□ 0.69
MBD4O95243 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MBD4O95243 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC19.34■□□□□ 0.69
MBD4O95243 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
MBD4O95243 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC19.34■□□□□ 0.69
MBD4O95243 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
MBD4O95243 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MBD4O95243 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MBD4O95243 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
MBD4O95243 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
MBD4O95243 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
MBD4O95243 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
MBD4O95243 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC19.34■□□□□ 0.69
MBD4O95243 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
MBD4O95243 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
MBD4O95243 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC19.33■□□□□ 0.69
MBD4O95243 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
MBD4O95243 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC19.33■□□□□ 0.69
MBD4O95243 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC19.33■□□□□ 0.69
MBD4O95243 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC19.33■□□□□ 0.69
MBD4O95243 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MBD4O95243 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
MBD4O95243 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MBD4O95243 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
MBD4O95243 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
MBD4O95243 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC19.33■□□□□ 0.69
MBD4O95243 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
MBD4O95243 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC19.33■□□□□ 0.68
MBD4O95243 MIR661-201ENST00000384842 89 ntBASIC19.33■□□□□ 0.68
MBD4O95243 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.33■□□□□ 0.68
MBD4O95243 CENPM-206ENST00000407253 818 ntTSL 2 BASIC19.33■□□□□ 0.68
MBD4O95243 MRPS18AP1-201ENST00000414458 589 ntBASIC19.33■□□□□ 0.68
MBD4O95243 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC19.33■□□□□ 0.68
MBD4O95243 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.33■□□□□ 0.68
MBD4O95243 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC19.33■□□□□ 0.68
MBD4O95243 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC19.33■□□□□ 0.68
MBD4O95243 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
MBD4O95243 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
MBD4O95243 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.33■□□□□ 0.68
MBD4O95243 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
MBD4O95243 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.68
MBD4O95243 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC19.33■□□□□ 0.68
MBD4O95243 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
MBD4O95243 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
MBD4O95243 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.33■□□□□ 0.68
MBD4O95243 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC19.33■□□□□ 0.68
MBD4O95243 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
MBD4O95243 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
MBD4O95243 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
MBD4O95243 KRT8P12-202ENST00000472924 1397 ntBASIC19.32■□□□□ 0.68
MBD4O95243 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC19.32■□□□□ 0.68
MBD4O95243 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MBD4O95243 PGR-209ENST00000617858 2816 ntTSL 5 BASIC19.32■□□□□ 0.68
MBD4O95243 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC19.32■□□□□ 0.68
MBD4O95243 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
MBD4O95243 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MBD4O95243 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MBD4O95243 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
MBD4O95243 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MBD4O95243 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC19.32■□□□□ 0.68
MBD4O95243 HNRNPA1P40-201ENST00000426371 1278 ntBASIC19.32■□□□□ 0.68
MBD4O95243 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MBD4O95243 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC19.32■□□□□ 0.68
MBD4O95243 AL512361.1-201ENST00000554200 418 ntBASIC19.32■□□□□ 0.68
MBD4O95243 AC092364.2-202ENST00000597012 1073 ntBASIC19.32■□□□□ 0.68
MBD4O95243 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.32■□□□□ 0.68
MBD4O95243 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC19.32■□□□□ 0.68
MBD4O95243 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
MBD4O95243 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.32■□□□□ 0.68
MBD4O95243 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
MBD4O95243 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MBD4O95243 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MBD4O95243 AL691432.1-201ENST00000596308 1422 ntBASIC19.32■□□□□ 0.68
MBD4O95243 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
MBD4O95243 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
MBD4O95243 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
MBD4O95243 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
MBD4O95243 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms