Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC7.11□□□□□ -1.27
USH2AO75445 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC7.11□□□□□ -1.27
USH2AO75445 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC7.11□□□□□ -1.27
USH2AO75445 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC7.11□□□□□ -1.27
USH2AO75445 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC7.11□□□□□ -1.27
USH2AO75445 AC104073.2-201ENST00000453737 312 ntBASIC7.11□□□□□ -1.27
USH2AO75445 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC7.11□□□□□ -1.27
USH2AO75445 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 AC012158.2-201ENST00000536546 354 ntBASIC7.11□□□□□ -1.27
USH2AO75445 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
USH2AO75445 AL353770.1-201ENST00000614915 403 ntBASIC7.11□□□□□ -1.27
USH2AO75445 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC7.11□□□□□ -1.27
USH2AO75445 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
USH2AO75445 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC7.11□□□□□ -1.27
USH2AO75445 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC7.11□□□□□ -1.27
USH2AO75445 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
USH2AO75445 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC7.11□□□□□ -1.27
USH2AO75445 CNN2P10-201ENST00000443067 918 ntBASIC7.11□□□□□ -1.27
USH2AO75445 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC7.11□□□□□ -1.27
USH2AO75445 IGHV3-37-201ENST00000518544 340 ntBASIC7.11□□□□□ -1.27
USH2AO75445 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC7.11□□□□□ -1.27
USH2AO75445 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC7.11□□□□□ -1.27
USH2AO75445 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC7.11□□□□□ -1.27
USH2AO75445 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC7.11□□□□□ -1.27
USH2AO75445 AC103691.2-201ENST00000618824 433 ntBASIC7.11□□□□□ -1.27
USH2AO75445 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
USH2AO75445 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
USH2AO75445 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
USH2AO75445 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
USH2AO75445 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
USH2AO75445 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
USH2AO75445 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
USH2AO75445 CYP4F24P-201ENST00000586049 1580 ntBASIC7.1□□□□□ -1.27
USH2AO75445 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
USH2AO75445 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
USH2AO75445 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC7.1□□□□□ -1.27
USH2AO75445 DNAJB1P1-201ENST00000429417 1024 ntBASIC7.1□□□□□ -1.27
USH2AO75445 SCARNA21-201ENST00000517026 139 ntBASIC7.1□□□□□ -1.27
USH2AO75445 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
USH2AO75445 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC7.1□□□□□ -1.27
USH2AO75445 KLK11-210ENST00000600362 759 ntTSL 3 BASIC7.1□□□□□ -1.27
USH2AO75445 AC138466.4-201ENST00000623965 852 ntBASIC7.1□□□□□ -1.27
USH2AO75445 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
USH2AO75445 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC7.1□□□□□ -1.27
USH2AO75445 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC7.1□□□□□ -1.27
USH2AO75445 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
USH2AO75445 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
USH2AO75445 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
USH2AO75445 KRT8P39-201ENST00000396270 1433 ntBASIC7.1□□□□□ -1.27
USH2AO75445 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
USH2AO75445 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
USH2AO75445 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC7.1□□□□□ -1.27
USH2AO75445 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
USH2AO75445 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC7.1□□□□□ -1.27
USH2AO75445 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
USH2AO75445 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
USH2AO75445 SDHD-202ENST00000525291 790 ntTSL 3 BASIC7.1□□□□□ -1.27
USH2AO75445 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
USH2AO75445 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
USH2AO75445 AL021920.2-201ENST00000624828 1351 ntBASIC7.1□□□□□ -1.27
USH2AO75445 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
USH2AO75445 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
USH2AO75445 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC7.1□□□□□ -1.27
USH2AO75445 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC7.1□□□□□ -1.27
USH2AO75445 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC7.1□□□□□ -1.27
USH2AO75445 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC7.1□□□□□ -1.27
USH2AO75445 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
USH2AO75445 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
USH2AO75445 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC7.1□□□□□ -1.27
USH2AO75445 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
USH2AO75445 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
USH2AO75445 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC7.1□□□□□ -1.27
USH2AO75445 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC7.1□□□□□ -1.27
USH2AO75445 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC7.1□□□□□ -1.27
USH2AO75445 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC7.1□□□□□ -1.27
USH2AO75445 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC7.1□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms