Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.25■□□□□ 0.03
TRIM3O75382 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.25■□□□□ 0.03
TRIM3O75382 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM3O75382 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM3O75382 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.25■□□□□ 0.03
TRIM3O75382 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM3O75382 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.25■□□□□ 0.03
TRIM3O75382 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM3O75382 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM3O75382 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM3O75382 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TRIM3O75382 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM3O75382 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM3O75382 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM3O75382 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TRIM3O75382 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM3O75382 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM3O75382 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TRIM3O75382 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TRIM3O75382 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TRIM3O75382 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM3O75382 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.24■□□□□ 0.03
TRIM3O75382 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM3O75382 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM3O75382 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.24■□□□□ 0.03
TRIM3O75382 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM3O75382 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.24■□□□□ 0.03
TRIM3O75382 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.24■□□□□ 0.03
TRIM3O75382 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.24■□□□□ 0.03
TRIM3O75382 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM3O75382 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM3O75382 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM3O75382 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
TRIM3O75382 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.24■□□□□ 0.03
TRIM3O75382 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM3O75382 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM3O75382 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC15.24■□□□□ 0.03
TRIM3O75382 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM3O75382 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TRIM3O75382 CNN2P11-201ENST00000429351 262 ntBASIC15.24■□□□□ 0.03
TRIM3O75382 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM3O75382 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM3O75382 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.24■□□□□ 0.03
TRIM3O75382 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM3O75382 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM3O75382 AP000344.2-201ENST00000512987 629 ntBASIC15.24■□□□□ 0.03
TRIM3O75382 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TRIM3O75382 SNHG9-202ENST00000564014 471 ntBASIC15.24■□□□□ 0.03
TRIM3O75382 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.24■□□□□ 0.03
TRIM3O75382 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TRIM3O75382 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.24■□□□□ 0.03
TRIM3O75382 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.24■□□□□ 0.03
TRIM3O75382 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.24■□□□□ 0.03
TRIM3O75382 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.24■□□□□ 0.03
TRIM3O75382 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.24■□□□□ 0.03
TRIM3O75382 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM3O75382 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM3O75382 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
TRIM3O75382 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM3O75382 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM3O75382 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TRIM3O75382 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM3O75382 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM3O75382 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.24■□□□□ 0.03
TRIM3O75382 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.24■□□□□ 0.03
TRIM3O75382 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TRIM3O75382 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.24■□□□□ 0.03
TRIM3O75382 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TRIM3O75382 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
TRIM3O75382 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
TRIM3O75382 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM3O75382 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM3O75382 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.24■□□□□ 0.03
TRIM3O75382 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM3O75382 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM3O75382 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM3O75382 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM3O75382 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM3O75382 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
TRIM3O75382 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC15.23■□□□□ 0.03
TRIM3O75382 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TRIM3O75382 AKAP8P1-201ENST00000434743 1349 ntBASIC15.23■□□□□ 0.03
TRIM3O75382 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TRIM3O75382 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM3O75382 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM3O75382 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM3O75382 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM3O75382 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM3O75382 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM3O75382 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.23■□□□□ 0.03
TRIM3O75382 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM3O75382 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM3O75382 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC15.23■□□□□ 0.03
TRIM3O75382 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.23■□□□□ 0.03
TRIM3O75382 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM3O75382 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.23■□□□□ 0.03
TRIM3O75382 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.23■□□□□ 0.03
TRIM3O75382 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.23■□□□□ 0.03
TRIM3O75382 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TRIM3O75382 RARRES2P8-201ENST00000566335 367 ntBASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms