Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 AC132008.2-207ENST00000454517 770 ntBASIC16.5■□□□□ 0.23
CDH16O75309 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.5■□□□□ 0.23
CDH16O75309 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.5■□□□□ 0.23
CDH16O75309 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.5■□□□□ 0.23
CDH16O75309 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.5■□□□□ 0.23
CDH16O75309 MIR3180-1-201ENST00000580374 94 ntBASIC16.5■□□□□ 0.23
CDH16O75309 MIR3180-3-201ENST00000584616 94 ntBASIC16.5■□□□□ 0.23
CDH16O75309 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.5■□□□□ 0.23
CDH16O75309 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH16O75309 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.5■□□□□ 0.23
CDH16O75309 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.5■□□□□ 0.23
CDH16O75309 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.5■□□□□ 0.23
CDH16O75309 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDH16O75309 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CDH16O75309 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH16O75309 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH16O75309 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH16O75309 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH16O75309 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH16O75309 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.5■□□□□ 0.23
CDH16O75309 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH16O75309 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CDH16O75309 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.5■□□□□ 0.23
CDH16O75309 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH16O75309 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CDH16O75309 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH16O75309 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDH16O75309 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
CDH16O75309 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH16O75309 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.49■□□□□ 0.23
CDH16O75309 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH16O75309 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.49■□□□□ 0.23
CDH16O75309 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH16O75309 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH16O75309 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH16O75309 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
CDH16O75309 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH16O75309 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CDH16O75309 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
CDH16O75309 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDH16O75309 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH16O75309 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDH16O75309 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDH16O75309 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
CDH16O75309 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDH16O75309 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.49■□□□□ 0.23
CDH16O75309 KRT16P4-201ENST00000453883 522 ntBASIC16.49■□□□□ 0.23
CDH16O75309 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.49■□□□□ 0.23
CDH16O75309 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.49■□□□□ 0.23
CDH16O75309 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.49■□□□□ 0.23
CDH16O75309 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.49■□□□□ 0.23
CDH16O75309 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.49■□□□□ 0.23
CDH16O75309 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.49■□□□□ 0.23
CDH16O75309 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CDH16O75309 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.49■□□□□ 0.23
CDH16O75309 AL805961.1-202ENST00000641562 540 ntBASIC16.49■□□□□ 0.23
CDH16O75309 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CDH16O75309 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDH16O75309 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH16O75309 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDH16O75309 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH16O75309 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CDH16O75309 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
CDH16O75309 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH16O75309 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDH16O75309 AC138035.3-201ENST00000622706 2791 ntBASIC16.49■□□□□ 0.23
CDH16O75309 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH16O75309 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH16O75309 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CDH16O75309 AC129492.6-201ENST00000611383 1305 ntBASIC16.48■□□□□ 0.23
CDH16O75309 AC087481.3-201ENST00000602886 1894 ntBASIC16.48■□□□□ 0.23
CDH16O75309 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CDH16O75309 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH16O75309 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CDH16O75309 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDH16O75309 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.48■□□□□ 0.23
CDH16O75309 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH16O75309 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.48■□□□□ 0.23
CDH16O75309 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH16O75309 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.48■□□□□ 0.23
CDH16O75309 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH16O75309 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH16O75309 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH16O75309 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.48■□□□□ 0.23
CDH16O75309 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDH16O75309 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.48■□□□□ 0.23
CDH16O75309 AL160237.2-201ENST00000556165 472 ntBASIC16.48■□□□□ 0.23
CDH16O75309 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
CDH16O75309 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.48■□□□□ 0.23
CDH16O75309 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CDH16O75309 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
CDH16O75309 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.48■□□□□ 0.23
CDH16O75309 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH16O75309 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CDH16O75309 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.48■□□□□ 0.23
CDH16O75309 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CDH16O75309 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
CDH16O75309 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CDH16O75309 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.48■□□□□ 0.23
CDH16O75309 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms