Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC15.64■□□□□ 0.09
PRAMEF4O60810 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.64■□□□□ 0.09
PRAMEF4O60810 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.64■□□□□ 0.09
PRAMEF4O60810 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.64■□□□□ 0.09
PRAMEF4O60810 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEF4O60810 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEF4O60810 SPDYE11-202ENST00000450699 704 ntBASIC15.64■□□□□ 0.09
PRAMEF4O60810 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PRAMEF4O60810 TIMM8BP1-201ENST00000452384 211 ntBASIC15.64■□□□□ 0.09
PRAMEF4O60810 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.64■□□□□ 0.09
PRAMEF4O60810 YBX1P5-201ENST00000509441 847 ntBASIC15.64■□□□□ 0.09
PRAMEF4O60810 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.64■□□□□ 0.09
PRAMEF4O60810 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEF4O60810 SPDYE9P-201ENST00000570642 692 ntBASIC15.64■□□□□ 0.09
PRAMEF4O60810 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.64■□□□□ 0.09
PRAMEF4O60810 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC15.64■□□□□ 0.09
PRAMEF4O60810 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PRAMEF4O60810 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEF4O60810 SPDYE10P-202ENST00000612005 668 ntBASIC15.64■□□□□ 0.09
PRAMEF4O60810 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
PRAMEF4O60810 SPDYE8P-202ENST00000612377 668 ntBASIC15.64■□□□□ 0.09
PRAMEF4O60810 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEF4O60810 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
PRAMEF4O60810 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEF4O60810 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PRAMEF4O60810 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PRAMEF4O60810 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEF4O60810 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC15.64■□□□□ 0.09
PRAMEF4O60810 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
PRAMEF4O60810 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEF4O60810 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEF4O60810 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEF4O60810 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.64■□□□□ 0.09
PRAMEF4O60810 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PRAMEF4O60810 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PRAMEF4O60810 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
PRAMEF4O60810 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEF4O60810 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEF4O60810 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEF4O60810 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.63■□□□□ 0.09
PRAMEF4O60810 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEF4O60810 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
PRAMEF4O60810 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEF4O60810 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEF4O60810 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEF4O60810 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEF4O60810 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.63■□□□□ 0.09
PRAMEF4O60810 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.63■□□□□ 0.09
PRAMEF4O60810 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEF4O60810 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.63■□□□□ 0.09
PRAMEF4O60810 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEF4O60810 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.63■□□□□ 0.09
PRAMEF4O60810 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEF4O60810 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEF4O60810 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PRAMEF4O60810 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.63■□□□□ 0.09
PRAMEF4O60810 HAUS4P1-201ENST00000406739 1145 ntBASIC15.63■□□□□ 0.09
PRAMEF4O60810 ACTG1P14-201ENST00000446382 1122 ntBASIC15.63■□□□□ 0.09
PRAMEF4O60810 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
PRAMEF4O60810 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.63■□□□□ 0.09
PRAMEF4O60810 AC112482.1-201ENST00000492080 688 ntBASIC15.63■□□□□ 0.09
PRAMEF4O60810 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEF4O60810 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.63■□□□□ 0.09
PRAMEF4O60810 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC15.63■□□□□ 0.09
PRAMEF4O60810 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC15.63■□□□□ 0.09
PRAMEF4O60810 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.63■□□□□ 0.09
PRAMEF4O60810 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.63■□□□□ 0.09
PRAMEF4O60810 AC105339.1-204ENST00000636249 355 ntBASIC15.63■□□□□ 0.09
PRAMEF4O60810 AC084121.4-201ENST00000641598 221 ntBASIC15.63■□□□□ 0.09
PRAMEF4O60810 AF228730.8-201ENST00000642140 221 ntBASIC15.63■□□□□ 0.09
PRAMEF4O60810 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEF4O60810 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEF4O60810 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEF4O60810 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.63■□□□□ 0.09
PRAMEF4O60810 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEF4O60810 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEF4O60810 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
PRAMEF4O60810 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEF4O60810 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEF4O60810 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEF4O60810 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEF4O60810 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
PRAMEF4O60810 PRAL-201ENST00000624952 3286 ntBASIC15.62■□□□□ 0.09
PRAMEF4O60810 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.62■□□□□ 0.09
PRAMEF4O60810 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEF4O60810 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEF4O60810 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.62■□□□□ 0.09
PRAMEF4O60810 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEF4O60810 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.62■□□□□ 0.09
PRAMEF4O60810 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEF4O60810 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEF4O60810 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEF4O60810 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
PRAMEF4O60810 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PRAMEF4O60810 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.62■□□□□ 0.09
PRAMEF4O60810 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.62■□□□□ 0.09
PRAMEF4O60810 AC245100.5-201ENST00000452108 331 ntBASIC15.62■□□□□ 0.09
PRAMEF4O60810 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.62■□□□□ 0.09
PRAMEF4O60810 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.62■□□□□ 0.09
PRAMEF4O60810 RN7SL589P-201ENST00000481268 310 ntBASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 144.6 ms