Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.23■□□□□ 0.03
ARHGEF9O43307 MYO15B-237ENST00000642007 4893 ntBASIC15.23■□□□□ 0.03
ARHGEF9O43307 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
ARHGEF9O43307 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ARHGEF9O43307 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.23■□□□□ 0.03
ARHGEF9O43307 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
ARHGEF9O43307 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
ARHGEF9O43307 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
ARHGEF9O43307 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF9O43307 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF9O43307 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF9O43307 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.22■□□□□ 0.03
ARHGEF9O43307 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF9O43307 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF9O43307 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF9O43307 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF9O43307 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
ARHGEF9O43307 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF9O43307 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF9O43307 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF9O43307 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF9O43307 AL645728.1-201ENST00000366221 2101 ntBASIC15.22■□□□□ 0.03
ARHGEF9O43307 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF9O43307 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF9O43307 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF9O43307 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF9O43307 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF9O43307 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF9O43307 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF9O43307 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.22■□□□□ 0.03
ARHGEF9O43307 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF9O43307 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.22■□□□□ 0.03
ARHGEF9O43307 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.22■□□□□ 0.03
ARHGEF9O43307 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
ARHGEF9O43307 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.22■□□□□ 0.03
ARHGEF9O43307 RNA5SP415-201ENST00000517246 115 ntBASIC15.22■□□□□ 0.03
ARHGEF9O43307 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.22■□□□□ 0.03
ARHGEF9O43307 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF9O43307 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF9O43307 AC002347.1-201ENST00000569543 541 ntBASIC15.22■□□□□ 0.03
ARHGEF9O43307 AC027796.2-201ENST00000575326 344 ntBASIC15.22■□□□□ 0.03
ARHGEF9O43307 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.22■□□□□ 0.03
ARHGEF9O43307 NKAPP1-205ENST00000585790 367 ntBASIC15.22■□□□□ 0.03
ARHGEF9O43307 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF9O43307 AL139288.1-201ENST00000623748 933 ntBASIC15.22■□□□□ 0.03
ARHGEF9O43307 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF9O43307 AL022326.1-202ENST00000641533 845 ntBASIC15.22■□□□□ 0.03
ARHGEF9O43307 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
ARHGEF9O43307 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
ARHGEF9O43307 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF9O43307 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF9O43307 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF9O43307 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.22■□□□□ 0.03
ARHGEF9O43307 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF9O43307 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF9O43307 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF9O43307 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.22■□□□□ 0.03
ARHGEF9O43307 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF9O43307 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
ARHGEF9O43307 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF9O43307 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.22■□□□□ 0.03
ARHGEF9O43307 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
ARHGEF9O43307 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF9O43307 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF9O43307 AL021920.2-201ENST00000624828 1351 ntBASIC15.22■□□□□ 0.03
ARHGEF9O43307 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF9O43307 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF9O43307 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
ARHGEF9O43307 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
ARHGEF9O43307 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ARHGEF9O43307 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.21■□□□□ 0.03
ARHGEF9O43307 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
ARHGEF9O43307 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
ARHGEF9O43307 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ARHGEF9O43307 AL590787.1-201ENST00000568856 1315 ntBASIC15.21■□□□□ 0.03
ARHGEF9O43307 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
ARHGEF9O43307 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ARHGEF9O43307 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
ARHGEF9O43307 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ARHGEF9O43307 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ARHGEF9O43307 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ARHGEF9O43307 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ARHGEF9O43307 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ARHGEF9O43307 TCAF2P1-201ENST00000291129 2421 ntBASIC15.21■□□□□ 0.03
ARHGEF9O43307 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ARHGEF9O43307 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ARHGEF9O43307 NCF1C-201ENST00000438382 1427 ntBASIC15.21■□□□□ 0.03
ARHGEF9O43307 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
ARHGEF9O43307 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ARHGEF9O43307 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
ARHGEF9O43307 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.21■□□□□ 0.03
ARHGEF9O43307 YBX2P1-201ENST00000394192 760 ntBASIC15.21■□□□□ 0.03
ARHGEF9O43307 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ARHGEF9O43307 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.21■□□□□ 0.03
ARHGEF9O43307 AC112482.1-201ENST00000492080 688 ntBASIC15.21■□□□□ 0.03
ARHGEF9O43307 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.21■□□□□ 0.03
ARHGEF9O43307 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
ARHGEF9O43307 AC105339.3-201ENST00000560043 636 ntBASIC15.21■□□□□ 0.03
ARHGEF9O43307 AC034105.1-201ENST00000563488 319 ntBASIC15.21■□□□□ 0.03
ARHGEF9O43307 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms