Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC19.37■□□□□ 0.69
FOXN1O15353 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
FOXN1O15353 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
FOXN1O15353 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXN1O15353 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXN1O15353 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXN1O15353 AGER-203ENST00000375065 665 ntTSL 2 BASIC19.37■□□□□ 0.69
FOXN1O15353 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
FOXN1O15353 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
FOXN1O15353 CSF2RBP1-201ENST00000447905 391 ntBASIC19.37■□□□□ 0.69
FOXN1O15353 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC19.37■□□□□ 0.69
FOXN1O15353 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC19.37■□□□□ 0.69
FOXN1O15353 5S_rRNA.22-201ENST00000614916 106 ntBASIC19.37■□□□□ 0.69
FOXN1O15353 AC015967.2-201ENST00000624092 234 ntBASIC19.37■□□□□ 0.69
FOXN1O15353 AC006435.4-201ENST00000625037 234 ntBASIC19.37■□□□□ 0.69
FOXN1O15353 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
FOXN1O15353 AL356737.1-201ENST00000634391 234 ntBASIC19.37■□□□□ 0.69
FOXN1O15353 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.37■□□□□ 0.69
FOXN1O15353 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXN1O15353 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXN1O15353 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
FOXN1O15353 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
FOXN1O15353 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
FOXN1O15353 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
FOXN1O15353 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
FOXN1O15353 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
FOXN1O15353 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.37■□□□□ 0.69
FOXN1O15353 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FOXN1O15353 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC19.36■□□□□ 0.69
FOXN1O15353 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FOXN1O15353 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
FOXN1O15353 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
FOXN1O15353 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
FOXN1O15353 AC018665.1-201ENST00000622927 1362 ntBASIC19.36■□□□□ 0.69
FOXN1O15353 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
FOXN1O15353 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FOXN1O15353 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FOXN1O15353 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FOXN1O15353 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC19.36■□□□□ 0.69
FOXN1O15353 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
FOXN1O15353 FAM21FP-201ENST00000426241 1131 ntBASIC19.36■□□□□ 0.69
FOXN1O15353 AL353705.2-201ENST00000428243 662 ntBASIC19.36■□□□□ 0.69
FOXN1O15353 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
FOXN1O15353 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC19.36■□□□□ 0.69
FOXN1O15353 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC19.36■□□□□ 0.69
FOXN1O15353 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FOXN1O15353 USP32P1-208ENST00000506594 1164 ntBASIC19.36■□□□□ 0.69
FOXN1O15353 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC19.36■□□□□ 0.69
FOXN1O15353 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
FOXN1O15353 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
FOXN1O15353 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FOXN1O15353 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FOXN1O15353 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC19.36■□□□□ 0.69
FOXN1O15353 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
FOXN1O15353 BCL2-203ENST00000589955 5011 ntBASIC19.36■□□□□ 0.69
FOXN1O15353 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
FOXN1O15353 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC19.36■□□□□ 0.69
FOXN1O15353 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
FOXN1O15353 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.36■□□□□ 0.69
FOXN1O15353 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.35■□□□□ 0.69
FOXN1O15353 FRMD8P1-201ENST00000440433 1524 ntBASIC19.35■□□□□ 0.69
FOXN1O15353 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
FOXN1O15353 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.35■□□□□ 0.69
FOXN1O15353 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.35■□□□□ 0.69
FOXN1O15353 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FOXN1O15353 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
FOXN1O15353 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
FOXN1O15353 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
FOXN1O15353 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.35■□□□□ 0.69
FOXN1O15353 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
FOXN1O15353 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FOXN1O15353 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
FOXN1O15353 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FOXN1O15353 AL080243.2-201ENST00000418783 582 ntBASIC19.35■□□□□ 0.69
FOXN1O15353 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC19.35■□□□□ 0.69
FOXN1O15353 KRT8P13-201ENST00000463294 1010 ntBASIC19.35■□□□□ 0.69
FOXN1O15353 AC105233.2-201ENST00000523697 349 ntBASIC19.35■□□□□ 0.69
FOXN1O15353 AF228730.5-201ENST00000530288 346 ntBASIC19.35■□□□□ 0.69
FOXN1O15353 RAB35-202ENST00000534951 939 ntTSL 2 BASIC19.35■□□□□ 0.69
FOXN1O15353 TPRX2P-201ENST00000535362 881 ntBASIC19.35■□□□□ 0.69
FOXN1O15353 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC19.35■□□□□ 0.69
FOXN1O15353 AC044860.1-202ENST00000559481 777 ntBASIC19.35■□□□□ 0.69
FOXN1O15353 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC19.35■□□□□ 0.69
FOXN1O15353 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC19.35■□□□□ 0.69
FOXN1O15353 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC19.35■□□□□ 0.69
FOXN1O15353 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.35■□□□□ 0.69
FOXN1O15353 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FOXN1O15353 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
FOXN1O15353 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
FOXN1O15353 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.35■□□□□ 0.69
FOXN1O15353 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FOXN1O15353 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
FOXN1O15353 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC19.35■□□□□ 0.69
FOXN1O15353 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
FOXN1O15353 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
FOXN1O15353 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC19.35■□□□□ 0.69
FOXN1O15353 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
FOXN1O15353 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC19.35■□□□□ 0.69
FOXN1O15353 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
FOXN1O15353 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms