Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL21O00585 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL21O00585 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL21O00585 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL21O00585 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL21O00585 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCL21O00585 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.24□□□□□ -0.13
CCL21O00585 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.24□□□□□ -0.13
CCL21O00585 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCL21O00585 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL21O00585 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL21O00585 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CCL21O00585 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.24□□□□□ -0.13
CCL21O00585 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL21O00585 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14.24□□□□□ -0.13
CCL21O00585 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCL21O00585 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL21O00585 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
CCL21O00585 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.24□□□□□ -0.13
CCL21O00585 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCL21O00585 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CCL21O00585 HIST3H2BA-201ENST00000436555 524 ntBASIC14.24□□□□□ -0.13
CCL21O00585 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC14.24□□□□□ -0.13
CCL21O00585 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.24□□□□□ -0.13
CCL21O00585 USP32P1-208ENST00000506594 1164 ntBASIC14.24□□□□□ -0.13
CCL21O00585 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CCL21O00585 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.24□□□□□ -0.13
CCL21O00585 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.24□□□□□ -0.13
CCL21O00585 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.24□□□□□ -0.13
CCL21O00585 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.24□□□□□ -0.13
CCL21O00585 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.24□□□□□ -0.13
CCL21O00585 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.24□□□□□ -0.13
CCL21O00585 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC14.24□□□□□ -0.13
CCL21O00585 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL21O00585 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC14.24□□□□□ -0.13
CCL21O00585 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL21O00585 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
CCL21O00585 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CCL21O00585 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL21O00585 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCL21O00585 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.24□□□□□ -0.13
CCL21O00585 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCL21O00585 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.23□□□□□ -0.13
CCL21O00585 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL21O00585 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.23□□□□□ -0.13
CCL21O00585 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CCL21O00585 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.23□□□□□ -0.13
CCL21O00585 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCL21O00585 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CCL21O00585 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.23□□□□□ -0.13
CCL21O00585 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCL21O00585 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL21O00585 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL21O00585 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.23□□□□□ -0.13
CCL21O00585 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL21O00585 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CCL21O00585 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL21O00585 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL21O00585 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL21O00585 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.23□□□□□ -0.13
CCL21O00585 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CCL21O00585 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCL21O00585 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
CCL21O00585 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CCL21O00585 BRWD1P1-201ENST00000401091 371 ntBASIC14.23□□□□□ -0.13
CCL21O00585 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.23□□□□□ -0.13
CCL21O00585 ACTBP11-201ENST00000436287 1126 ntBASIC14.23□□□□□ -0.13
CCL21O00585 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.23□□□□□ -0.13
CCL21O00585 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC14.23□□□□□ -0.13
CCL21O00585 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CCL21O00585 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCL21O00585 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.23□□□□□ -0.13
CCL21O00585 TDH-203ENST00000531764 1110 ntBASIC14.23□□□□□ -0.13
CCL21O00585 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC14.23□□□□□ -0.13
CCL21O00585 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.23□□□□□ -0.13
CCL21O00585 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC14.23□□□□□ -0.13
CCL21O00585 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.23□□□□□ -0.13
CCL21O00585 AL022328.1-201ENST00000610050 478 ntBASIC14.23□□□□□ -0.13
CCL21O00585 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.23□□□□□ -0.13
CCL21O00585 PDIA3P1-201ENST00000471856 1510 ntBASIC14.23□□□□□ -0.13
CCL21O00585 AL133338.1-201ENST00000565695 1517 ntBASIC14.23□□□□□ -0.13
CCL21O00585 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL21O00585 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL21O00585 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CCL21O00585 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CCL21O00585 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL21O00585 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.23□□□□□ -0.13
CCL21O00585 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCL21O00585 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.23□□□□□ -0.13
CCL21O00585 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCL21O00585 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CCL21O00585 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCL21O00585 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CCL21O00585 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
CCL21O00585 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.23□□□□□ -0.13
CCL21O00585 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC14.23□□□□□ -0.13
CCL21O00585 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CCL21O00585 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL21O00585 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCL21O00585 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms