Protein–RNA interactions for Protein: O00443

PIK3C2A, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, humanhuman

Predictions only

Length 1,686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C2AO00443 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
PIK3C2AO00443 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC21.39■■□□□ 1.01
PIK3C2AO00443 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PIK3C2AO00443 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PIK3C2AO00443 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PIK3C2AO00443 APOC3-202ENST00000375345 604 ntTSL 5 BASIC21.39■■□□□ 1.01
PIK3C2AO00443 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC21.39■■□□□ 1.01
PIK3C2AO00443 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC21.39■■□□□ 1.01
PIK3C2AO00443 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC21.39■■□□□ 1.01
PIK3C2AO00443 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC21.39■■□□□ 1.01
PIK3C2AO00443 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC21.39■■□□□ 1.01
PIK3C2AO00443 DUX4L45-201ENST00000566406 1057 ntBASIC21.39■■□□□ 1.01
PIK3C2AO00443 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PIK3C2AO00443 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PIK3C2AO00443 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PIK3C2AO00443 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC21.39■■□□□ 1.01
PIK3C2AO00443 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PIK3C2AO00443 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PIK3C2AO00443 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
PIK3C2AO00443 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PIK3C2AO00443 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PIK3C2AO00443 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
PIK3C2AO00443 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC21.39■■□□□ 1.01
PIK3C2AO00443 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PIK3C2AO00443 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC21.39■■□□□ 1.01
PIK3C2AO00443 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PIK3C2AO00443 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PIK3C2AO00443 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PIK3C2AO00443 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
PIK3C2AO00443 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PIK3C2AO00443 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
PIK3C2AO00443 OLR1-203ENST00000432556 950 ntTSL 2 BASIC21.38■■□□□ 1.01
PIK3C2AO00443 AC026410.3-201ENST00000514280 936 ntBASIC21.38■■□□□ 1.01
PIK3C2AO00443 FAM8A2P-201ENST00000528813 1142 ntBASIC21.38■■□□□ 1.01
PIK3C2AO00443 ENPP7P5-201ENST00000541031 1031 ntBASIC21.38■■□□□ 1.01
PIK3C2AO00443 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC21.38■■□□□ 1.01
PIK3C2AO00443 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC21.38■■□□□ 1.01
PIK3C2AO00443 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC21.38■■□□□ 1.01
PIK3C2AO00443 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PIK3C2AO00443 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC21.38■■□□□ 1.01
PIK3C2AO00443 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PIK3C2AO00443 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PIK3C2AO00443 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PIK3C2AO00443 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PIK3C2AO00443 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PIK3C2AO00443 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PIK3C2AO00443 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PIK3C2AO00443 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
PIK3C2AO00443 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC21.38■■□□□ 1.01
PIK3C2AO00443 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PIK3C2AO00443 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
PIK3C2AO00443 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PIK3C2AO00443 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
PIK3C2AO00443 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC21.37■■□□□ 1.01
PIK3C2AO00443 AC026954.1-201ENST00000429771 1293 ntBASIC21.37■■□□□ 1.01
PIK3C2AO00443 AC245100.3-201ENST00000441281 285 ntBASIC21.37■■□□□ 1.01
PIK3C2AO00443 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC21.37■■□□□ 1.01
PIK3C2AO00443 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PIK3C2AO00443 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
PIK3C2AO00443 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
PIK3C2AO00443 GPR182-203ENST00000622922 591 ntBASIC21.37■■□□□ 1.01
PIK3C2AO00443 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC21.37■■□□□ 1.01
PIK3C2AO00443 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PIK3C2AO00443 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC21.37■■□□□ 1.01
PIK3C2AO00443 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
PIK3C2AO00443 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
PIK3C2AO00443 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC21.37■■□□□ 1.01
PIK3C2AO00443 FLJ38576-201ENST00000623820 2459 ntBASIC21.37■■□□□ 1.01
PIK3C2AO00443 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC21.37■■□□□ 1.01
PIK3C2AO00443 AL133338.1-201ENST00000565695 1517 ntBASIC21.37■■□□□ 1.01
PIK3C2AO00443 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC21.37■■□□□ 1.01
PIK3C2AO00443 LRRFIP1P1-201ENST00000498774 2246 ntBASIC21.37■■□□□ 1.01
PIK3C2AO00443 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC21.37■■□□□ 1.01
PIK3C2AO00443 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PIK3C2AO00443 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PIK3C2AO00443 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
PIK3C2AO00443 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PIK3C2AO00443 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PIK3C2AO00443 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
PIK3C2AO00443 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC21.37■■□□□ 1.01
PIK3C2AO00443 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PIK3C2AO00443 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC21.37■■□□□ 1.01
PIK3C2AO00443 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
PIK3C2AO00443 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
PIK3C2AO00443 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC21.37■■□□□ 1.01
PIK3C2AO00443 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC21.37■■□□□ 1.01
PIK3C2AO00443 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PIK3C2AO00443 PFAS-212ENST00000625942 396 ntTSL 5 BASIC21.37■■□□□ 1.01
PIK3C2AO00443 RHOXF1P1-202ENST00000635473 501 ntBASIC21.37■■□□□ 1.01
PIK3C2AO00443 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC21.37■■□□□ 1.01
PIK3C2AO00443 DRD5P1-201ENST00000456605 1438 ntBASIC21.37■■□□□ 1.01
PIK3C2AO00443 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PIK3C2AO00443 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PIK3C2AO00443 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PIK3C2AO00443 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PIK3C2AO00443 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
PIK3C2AO00443 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PIK3C2AO00443 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PIK3C2AO00443 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC21.36■■□□□ 1.01
PIK3C2AO00443 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms