Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17.38■□□□□ 0.37
O00370 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
O00370 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
O00370 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
O00370 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.38■□□□□ 0.37
O00370 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
O00370 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
O00370 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.38■□□□□ 0.37
O00370 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
O00370 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
O00370 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
O00370 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
O00370 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
O00370 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
O00370 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
O00370 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
O00370 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
O00370 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
O00370 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
O00370 U82695.1-201ENST00000635752 1889 ntBASIC17.37■□□□□ 0.37
O00370 AL592424.1-201ENST00000563624 1536 ntBASIC17.37■□□□□ 0.37
O00370 AL589702.1-201ENST00000641229 1509 ntBASIC17.37■□□□□ 0.37
O00370 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC17.37■□□□□ 0.37
O00370 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
O00370 AL596087.1-201ENST00000400979 1969 ntBASIC17.37■□□□□ 0.37
O00370 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
O00370 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.37■□□□□ 0.37
O00370 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC17.37■□□□□ 0.37
O00370 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.37■□□□□ 0.37
O00370 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.37■□□□□ 0.37
O00370 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.37■□□□□ 0.37
O00370 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
O00370 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
O00370 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
O00370 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
O00370 PTMS-202ENST00000389462 773 ntTSL 2 BASIC17.37■□□□□ 0.37
O00370 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC17.37■□□□□ 0.37
O00370 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
O00370 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.37■□□□□ 0.37
O00370 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
O00370 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
O00370 IGHV3-62-201ENST00000520057 340 ntBASIC17.37■□□□□ 0.37
O00370 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
O00370 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.37■□□□□ 0.37
O00370 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.37■□□□□ 0.37
O00370 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC17.37■□□□□ 0.37
O00370 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.37■□□□□ 0.37
O00370 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.37■□□□□ 0.37
O00370 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
O00370 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
O00370 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
O00370 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.37■□□□□ 0.37
O00370 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
O00370 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
O00370 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
O00370 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
O00370 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
O00370 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.37■□□□□ 0.37
O00370 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
O00370 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
O00370 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.37■□□□□ 0.37
O00370 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
O00370 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
O00370 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.37■□□□□ 0.37
O00370 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
O00370 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
O00370 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
O00370 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
O00370 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.37■□□□□ 0.37
O00370 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
O00370 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
O00370 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
O00370 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
O00370 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
O00370 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
O00370 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
O00370 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.36■□□□□ 0.37
O00370 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.36■□□□□ 0.37
O00370 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
O00370 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.36■□□□□ 0.37
O00370 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
O00370 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
O00370 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
O00370 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
O00370 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
O00370 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
O00370 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.36■□□□□ 0.37
O00370 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
O00370 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
O00370 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.36■□□□□ 0.37
O00370 AC254562.1-201ENST00000417586 456 ntBASIC17.36■□□□□ 0.37
O00370 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
O00370 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
O00370 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.36■□□□□ 0.37
O00370 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.36■□□□□ 0.37
O00370 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
O00370 GOLGA2P9-201ENST00000596977 1937 ntBASIC17.36■□□□□ 0.37
O00370 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
O00370 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.36■□□□□ 0.37
O00370 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms