Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
UPK1AO00322 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
UPK1AO00322 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.45■□□□□ 0.06
UPK1AO00322 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
UPK1AO00322 MED15P5-201ENST00000423150 992 ntBASIC15.45■□□□□ 0.06
UPK1AO00322 AC092474.2-201ENST00000424288 719 ntBASIC15.45■□□□□ 0.06
UPK1AO00322 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
UPK1AO00322 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.45■□□□□ 0.06
UPK1AO00322 KRT18P3-201ENST00000451602 1288 ntBASIC15.45■□□□□ 0.06
UPK1AO00322 POU5F1P6-201ENST00000466990 990 ntBASIC15.45■□□□□ 0.06
UPK1AO00322 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.45■□□□□ 0.06
UPK1AO00322 RNA5SP416-201ENST00000516838 111 ntBASIC15.45■□□□□ 0.06
UPK1AO00322 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.45■□□□□ 0.06
UPK1AO00322 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.45■□□□□ 0.06
UPK1AO00322 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.45■□□□□ 0.06
UPK1AO00322 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.45■□□□□ 0.06
UPK1AO00322 FAM197Y3-203ENST00000618346 717 ntBASIC15.45■□□□□ 0.06
UPK1AO00322 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.45■□□□□ 0.06
UPK1AO00322 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.45■□□□□ 0.06
UPK1AO00322 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
UPK1AO00322 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
UPK1AO00322 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
UPK1AO00322 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
UPK1AO00322 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
UPK1AO00322 PRAL-201ENST00000624952 3286 ntBASIC15.45■□□□□ 0.06
UPK1AO00322 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
UPK1AO00322 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
UPK1AO00322 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
UPK1AO00322 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
UPK1AO00322 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
UPK1AO00322 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
UPK1AO00322 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
UPK1AO00322 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
UPK1AO00322 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
UPK1AO00322 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
UPK1AO00322 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.44■□□□□ 0.06
UPK1AO00322 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.44■□□□□ 0.06
UPK1AO00322 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
UPK1AO00322 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
UPK1AO00322 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.44■□□□□ 0.06
UPK1AO00322 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
UPK1AO00322 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
UPK1AO00322 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
UPK1AO00322 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
UPK1AO00322 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
UPK1AO00322 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
UPK1AO00322 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.44■□□□□ 0.06
UPK1AO00322 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.44■□□□□ 0.06
UPK1AO00322 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.44■□□□□ 0.06
UPK1AO00322 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
UPK1AO00322 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.44■□□□□ 0.06
UPK1AO00322 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
UPK1AO00322 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.44■□□□□ 0.06
UPK1AO00322 AL513190.1-201ENST00000621254 727 ntBASIC15.44■□□□□ 0.06
UPK1AO00322 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.44■□□□□ 0.06
UPK1AO00322 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
UPK1AO00322 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
UPK1AO00322 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
UPK1AO00322 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
UPK1AO00322 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
UPK1AO00322 TSPY26P-202ENST00000565928 3884 ntBASIC15.44■□□□□ 0.06
UPK1AO00322 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
UPK1AO00322 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
UPK1AO00322 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
UPK1AO00322 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
UPK1AO00322 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
UPK1AO00322 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.44■□□□□ 0.06
UPK1AO00322 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
UPK1AO00322 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
UPK1AO00322 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.43■□□□□ 0.06
UPK1AO00322 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1AO00322 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1AO00322 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1AO00322 AC092919.2-201ENST00000623631 1645 ntBASIC15.43■□□□□ 0.06
UPK1AO00322 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.43■□□□□ 0.06
UPK1AO00322 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1AO00322 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
UPK1AO00322 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1AO00322 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1AO00322 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
UPK1AO00322 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1AO00322 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1AO00322 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.43■□□□□ 0.06
UPK1AO00322 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1AO00322 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1AO00322 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1AO00322 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.43■□□□□ 0.06
UPK1AO00322 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1AO00322 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
UPK1AO00322 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1AO00322 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.43■□□□□ 0.06
UPK1AO00322 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.43■□□□□ 0.06
UPK1AO00322 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.43■□□□□ 0.06
UPK1AO00322 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.43■□□□□ 0.06
UPK1AO00322 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
UPK1AO00322 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
UPK1AO00322 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC15.43■□□□□ 0.06
UPK1AO00322 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
UPK1AO00322 PDPK2P-202ENST00000562415 1191 ntBASIC15.43■□□□□ 0.06
UPK1AO00322 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms