Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 AL589702.1-201ENST00000641229 1509 ntBASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 AKAP8P1-201ENST00000434743 1349 ntBASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 YBX2P1-201ENST00000394192 760 ntBASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 ALG1L5P-201ENST00000482043 771 ntBASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 AC010491.1-201ENST00000563101 2797 ntBASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC162PA2VCL2 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC162PA2VCL2 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC162PA2VCL2 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC162PA2VCL2 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC162PA2VCL2 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CCDC162PA2VCL2 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC162PA2VCL2 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC162PA2VCL2 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC162PA2VCL2 AL365203.3-201ENST00000609742 2057 ntBASIC16.3■□□□□ 0.2
CCDC162PA2VCL2 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CCDC162PA2VCL2 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC162PA2VCL2 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
CCDC162PA2VCL2 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC162PA2VCL2 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC162PA2VCL2 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC162PA2VCL2 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC162PA2VCL2 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC162PA2VCL2 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC162PA2VCL2 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.3■□□□□ 0.2
CCDC162PA2VCL2 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CCDC162PA2VCL2 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.3■□□□□ 0.2
CCDC162PA2VCL2 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC162PA2VCL2 MTDHP5-201ENST00000598980 586 ntBASIC16.3■□□□□ 0.2
CCDC162PA2VCL2 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.3■□□□□ 0.2
CCDC162PA2VCL2 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC162PA2VCL2 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC162PA2VCL2 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC162PA2VCL2 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC162PA2VCL2 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
CCDC162PA2VCL2 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC162PA2VCL2 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC162PA2VCL2 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC162PA2VCL2 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC162PA2VCL2 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.3■□□□□ 0.2
CCDC162PA2VCL2 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.3■□□□□ 0.2
CCDC162PA2VCL2 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC162PA2VCL2 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC162PA2VCL2 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CCDC162PA2VCL2 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC162PA2VCL2 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC162PA2VCL2 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CCDC162PA2VCL2 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CCDC162PA2VCL2 LINC00554-201ENST00000564841 3011 ntBASIC16.29■□□□□ 0.2
CCDC162PA2VCL2 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC162PA2VCL2 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC162PA2VCL2 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC162PA2VCL2 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC162PA2VCL2 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC162PA2VCL2 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC162PA2VCL2 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms