Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 SLC25A1P1-201ENST00000528351 927 ntBASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 PIN1-206ENST00000587625 878 ntTSL 2 BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 AQP6-205ENST00000618286 829 ntTSL 5 BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 BCAR1-209ENST00000546196 1340 ntBASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
HLA-DRB4X5D2U9 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC12.33□□□□□ -0.43
HLA-DRB4X5D2U9 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
HLA-DRB4X5D2U9 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 FALEC-201ENST00000416894 566 ntTSL 3 BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 HNRNPA1P28-201ENST00000424481 961 ntBASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 FIS1-203ENST00000442303 631 ntTSL 3 BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 MAL2-202ENST00000531508 892 ntTSL 3 BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 THTPA-204ENST00000554970 569 ntTSL 4 BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 THTPA-206ENST00000556015 535 ntTSL 3 BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 AC020765.3-201ENST00000613051 740 ntBASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 MED16-214ENST00000617672 554 ntTSL 5 BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 FAM197Y3-203ENST00000618346 717 ntBASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 AMT-233ENST00000636522 1620 ntTSL 2 BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
HLA-DRB4X5D2U9 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
HLA-DRB4X5D2U9 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms