Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
R3HCC1Q9Y3T6 OR7E14P-202ENST00000530490 1290 ntBASIC18.77■□□□□ 0.6
R3HCC1Q9Y3T6 AC021087.4-201ENST00000563761 564 ntBASIC18.77■□□□□ 0.6
R3HCC1Q9Y3T6 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
R3HCC1Q9Y3T6 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
R3HCC1Q9Y3T6 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC18.77■□□□□ 0.6
R3HCC1Q9Y3T6 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
R3HCC1Q9Y3T6 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
R3HCC1Q9Y3T6 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
R3HCC1Q9Y3T6 AC004817.3-201ENST00000602957 2129 ntBASIC18.77■□□□□ 0.6
R3HCC1Q9Y3T6 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
R3HCC1Q9Y3T6 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
R3HCC1Q9Y3T6 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
R3HCC1Q9Y3T6 ING5-213ENST00000636051 4199 ntTSL 5 BASIC18.77■□□□□ 0.59
R3HCC1Q9Y3T6 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
R3HCC1Q9Y3T6 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
R3HCC1Q9Y3T6 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
R3HCC1Q9Y3T6 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
R3HCC1Q9Y3T6 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
R3HCC1Q9Y3T6 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
R3HCC1Q9Y3T6 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.76■□□□□ 0.59
R3HCC1Q9Y3T6 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC18.76■□□□□ 0.59
R3HCC1Q9Y3T6 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
R3HCC1Q9Y3T6 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
R3HCC1Q9Y3T6 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
R3HCC1Q9Y3T6 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC18.76■□□□□ 0.59
R3HCC1Q9Y3T6 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
R3HCC1Q9Y3T6 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC18.76■□□□□ 0.59
R3HCC1Q9Y3T6 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
R3HCC1Q9Y3T6 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
R3HCC1Q9Y3T6 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
R3HCC1Q9Y3T6 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
R3HCC1Q9Y3T6 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.76■□□□□ 0.59
R3HCC1Q9Y3T6 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.76■□□□□ 0.59
R3HCC1Q9Y3T6 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.76■□□□□ 0.59
R3HCC1Q9Y3T6 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
R3HCC1Q9Y3T6 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.76■□□□□ 0.59
R3HCC1Q9Y3T6 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.76■□□□□ 0.59
R3HCC1Q9Y3T6 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
R3HCC1Q9Y3T6 AC139887.3-201ENST00000568585 713 ntBASIC18.76■□□□□ 0.59
R3HCC1Q9Y3T6 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.76■□□□□ 0.59
R3HCC1Q9Y3T6 AC104692.2-201ENST00000603054 253 ntBASIC18.76■□□□□ 0.59
R3HCC1Q9Y3T6 TP73-AS1-207ENST00000624167 988 ntBASIC18.76■□□□□ 0.59
R3HCC1Q9Y3T6 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
R3HCC1Q9Y3T6 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC18.76■□□□□ 0.59
R3HCC1Q9Y3T6 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC18.76■□□□□ 0.59
R3HCC1Q9Y3T6 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.76■□□□□ 0.59
R3HCC1Q9Y3T6 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.76■□□□□ 0.59
R3HCC1Q9Y3T6 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC18.76■□□□□ 0.59
R3HCC1Q9Y3T6 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
R3HCC1Q9Y3T6 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
R3HCC1Q9Y3T6 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
R3HCC1Q9Y3T6 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
R3HCC1Q9Y3T6 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
R3HCC1Q9Y3T6 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
R3HCC1Q9Y3T6 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
R3HCC1Q9Y3T6 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC18.76■□□□□ 0.59
R3HCC1Q9Y3T6 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
R3HCC1Q9Y3T6 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
R3HCC1Q9Y3T6 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
R3HCC1Q9Y3T6 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
R3HCC1Q9Y3T6 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
R3HCC1Q9Y3T6 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
R3HCC1Q9Y3T6 AC097637.2-201ENST00000624096 1997 ntBASIC18.75■□□□□ 0.59
R3HCC1Q9Y3T6 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
R3HCC1Q9Y3T6 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
R3HCC1Q9Y3T6 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
R3HCC1Q9Y3T6 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
R3HCC1Q9Y3T6 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
R3HCC1Q9Y3T6 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC18.75■□□□□ 0.59
R3HCC1Q9Y3T6 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.75■□□□□ 0.59
R3HCC1Q9Y3T6 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
R3HCC1Q9Y3T6 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.75■□□□□ 0.59
R3HCC1Q9Y3T6 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
R3HCC1Q9Y3T6 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.75■□□□□ 0.59
R3HCC1Q9Y3T6 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.75■□□□□ 0.59
R3HCC1Q9Y3T6 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
R3HCC1Q9Y3T6 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
R3HCC1Q9Y3T6 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.75■□□□□ 0.59
R3HCC1Q9Y3T6 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.75■□□□□ 0.59
R3HCC1Q9Y3T6 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
R3HCC1Q9Y3T6 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.75■□□□□ 0.59
R3HCC1Q9Y3T6 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.75■□□□□ 0.59
R3HCC1Q9Y3T6 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
R3HCC1Q9Y3T6 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
R3HCC1Q9Y3T6 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
R3HCC1Q9Y3T6 AC006538.1-201ENST00000567905 1585 ntBASIC18.75■□□□□ 0.59
R3HCC1Q9Y3T6 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
R3HCC1Q9Y3T6 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.75■□□□□ 0.59
R3HCC1Q9Y3T6 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
R3HCC1Q9Y3T6 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
R3HCC1Q9Y3T6 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
R3HCC1Q9Y3T6 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
R3HCC1Q9Y3T6 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC18.75■□□□□ 0.59
R3HCC1Q9Y3T6 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
R3HCC1Q9Y3T6 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
R3HCC1Q9Y3T6 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
R3HCC1Q9Y3T6 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
R3HCC1Q9Y3T6 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
R3HCC1Q9Y3T6 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms