Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IFT52Q9Y366 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
IFT52Q9Y366 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IFT52Q9Y366 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
IFT52Q9Y366 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
IFT52Q9Y366 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
IFT52Q9Y366 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
IFT52Q9Y366 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
IFT52Q9Y366 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
IFT52Q9Y366 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
IFT52Q9Y366 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.33■□□□□ 0.05
IFT52Q9Y366 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
IFT52Q9Y366 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
IFT52Q9Y366 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.33■□□□□ 0.05
IFT52Q9Y366 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
IFT52Q9Y366 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.33■□□□□ 0.05
IFT52Q9Y366 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
IFT52Q9Y366 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.33■□□□□ 0.04
IFT52Q9Y366 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
IFT52Q9Y366 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
IFT52Q9Y366 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
IFT52Q9Y366 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
IFT52Q9Y366 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.33■□□□□ 0.04
IFT52Q9Y366 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.33■□□□□ 0.04
IFT52Q9Y366 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
IFT52Q9Y366 FAM185BP-201ENST00000443595 716 ntBASIC15.33■□□□□ 0.04
IFT52Q9Y366 MTRF1LP2-201ENST00000506027 1122 ntBASIC15.33■□□□□ 0.04
IFT52Q9Y366 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.33■□□□□ 0.04
IFT52Q9Y366 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.33■□□□□ 0.04
IFT52Q9Y366 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.33■□□□□ 0.04
IFT52Q9Y366 FAM215A-202ENST00000632077 792 ntBASIC15.33■□□□□ 0.04
IFT52Q9Y366 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
IFT52Q9Y366 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.33■□□□□ 0.04
IFT52Q9Y366 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
IFT52Q9Y366 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
IFT52Q9Y366 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
IFT52Q9Y366 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
IFT52Q9Y366 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
IFT52Q9Y366 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
IFT52Q9Y366 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
IFT52Q9Y366 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
IFT52Q9Y366 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
IFT52Q9Y366 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
IFT52Q9Y366 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
IFT52Q9Y366 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
IFT52Q9Y366 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
IFT52Q9Y366 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.32■□□□□ 0.04
IFT52Q9Y366 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
IFT52Q9Y366 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
IFT52Q9Y366 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
IFT52Q9Y366 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.32■□□□□ 0.04
IFT52Q9Y366 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
IFT52Q9Y366 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
IFT52Q9Y366 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.32■□□□□ 0.04
IFT52Q9Y366 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
IFT52Q9Y366 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
IFT52Q9Y366 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
IFT52Q9Y366 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
IFT52Q9Y366 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
IFT52Q9Y366 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
IFT52Q9Y366 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
IFT52Q9Y366 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
IFT52Q9Y366 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
IFT52Q9Y366 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
IFT52Q9Y366 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.32■□□□□ 0.04
IFT52Q9Y366 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
IFT52Q9Y366 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.32■□□□□ 0.04
IFT52Q9Y366 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC15.32■□□□□ 0.04
IFT52Q9Y366 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
IFT52Q9Y366 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.32■□□□□ 0.04
IFT52Q9Y366 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC15.32■□□□□ 0.04
IFT52Q9Y366 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.32■□□□□ 0.04
IFT52Q9Y366 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC15.32■□□□□ 0.04
IFT52Q9Y366 AL773604.1-201ENST00000617417 272 ntBASIC15.32■□□□□ 0.04
IFT52Q9Y366 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.32■□□□□ 0.04
IFT52Q9Y366 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
IFT52Q9Y366 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
IFT52Q9Y366 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
IFT52Q9Y366 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
IFT52Q9Y366 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
IFT52Q9Y366 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
IFT52Q9Y366 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
IFT52Q9Y366 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
IFT52Q9Y366 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.32■□□□□ 0.04
IFT52Q9Y366 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
IFT52Q9Y366 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.32■□□□□ 0.04
IFT52Q9Y366 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.32■□□□□ 0.04
IFT52Q9Y366 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
IFT52Q9Y366 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
IFT52Q9Y366 SLC9A7P1-201ENST00000554295 3311 ntBASIC15.32■□□□□ 0.04
IFT52Q9Y366 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFT52Q9Y366 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
IFT52Q9Y366 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
IFT52Q9Y366 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFT52Q9Y366 AC007326.2-201ENST00000624224 7579 ntBASIC15.31■□□□□ 0.04
IFT52Q9Y366 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.31■□□□□ 0.04
IFT52Q9Y366 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFT52Q9Y366 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFT52Q9Y366 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
IFT52Q9Y366 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms