Protein–RNA interactions for Protein: Q9UPU3

SORCS3, VPS10 domain-containing receptor SorCS3, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORCS3Q9UPU3 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SORCS3Q9UPU3 GNAQP1-201ENST00000444815 1067 ntBASIC17.16■□□□□ 0.34
SORCS3Q9UPU3 KRT18P34-201ENST00000488218 1270 ntBASIC17.16■□□□□ 0.34
SORCS3Q9UPU3 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.16■□□□□ 0.34
SORCS3Q9UPU3 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC17.16■□□□□ 0.34
SORCS3Q9UPU3 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.16■□□□□ 0.34
SORCS3Q9UPU3 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.16■□□□□ 0.34
SORCS3Q9UPU3 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
SORCS3Q9UPU3 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SORCS3Q9UPU3 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SORCS3Q9UPU3 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SORCS3Q9UPU3 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SORCS3Q9UPU3 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SORCS3Q9UPU3 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SORCS3Q9UPU3 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.16■□□□□ 0.34
SORCS3Q9UPU3 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SORCS3Q9UPU3 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SORCS3Q9UPU3 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SORCS3Q9UPU3 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SORCS3Q9UPU3 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SORCS3Q9UPU3 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SORCS3Q9UPU3 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SORCS3Q9UPU3 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SORCS3Q9UPU3 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SORCS3Q9UPU3 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SORCS3Q9UPU3 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SORCS3Q9UPU3 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
SORCS3Q9UPU3 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SORCS3Q9UPU3 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SORCS3Q9UPU3 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SORCS3Q9UPU3 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SORCS3Q9UPU3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SORCS3Q9UPU3 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SORCS3Q9UPU3 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SORCS3Q9UPU3 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SORCS3Q9UPU3 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SORCS3Q9UPU3 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SORCS3Q9UPU3 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
SORCS3Q9UPU3 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.15■□□□□ 0.34
SORCS3Q9UPU3 AC022210.1-201ENST00000449856 793 ntBASIC17.15■□□□□ 0.34
SORCS3Q9UPU3 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC17.15■□□□□ 0.34
SORCS3Q9UPU3 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC17.15■□□□□ 0.34
SORCS3Q9UPU3 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.15■□□□□ 0.34
SORCS3Q9UPU3 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.15■□□□□ 0.34
SORCS3Q9UPU3 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.15■□□□□ 0.34
SORCS3Q9UPU3 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.15■□□□□ 0.34
SORCS3Q9UPU3 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.15■□□□□ 0.34
SORCS3Q9UPU3 RN7SL828P-201ENST00000607615 303 ntBASIC17.15■□□□□ 0.34
SORCS3Q9UPU3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SORCS3Q9UPU3 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.15■□□□□ 0.34
SORCS3Q9UPU3 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.15■□□□□ 0.34
SORCS3Q9UPU3 LINC02012-201ENST00000608206 1725 ntBASIC17.15■□□□□ 0.34
SORCS3Q9UPU3 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.15■□□□□ 0.34
SORCS3Q9UPU3 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
SORCS3Q9UPU3 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SORCS3Q9UPU3 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SORCS3Q9UPU3 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SORCS3Q9UPU3 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
SORCS3Q9UPU3 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
SORCS3Q9UPU3 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.14■□□□□ 0.33
SORCS3Q9UPU3 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SORCS3Q9UPU3 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.14■□□□□ 0.33
SORCS3Q9UPU3 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.14■□□□□ 0.33
SORCS3Q9UPU3 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SORCS3Q9UPU3 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SORCS3Q9UPU3 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SORCS3Q9UPU3 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.14■□□□□ 0.33
SORCS3Q9UPU3 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.14■□□□□ 0.33
SORCS3Q9UPU3 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.14■□□□□ 0.33
SORCS3Q9UPU3 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC17.14■□□□□ 0.33
SORCS3Q9UPU3 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.14■□□□□ 0.33
SORCS3Q9UPU3 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SORCS3Q9UPU3 AC093004.1-201ENST00000508850 424 ntBASIC17.14■□□□□ 0.33
SORCS3Q9UPU3 ZNF890P-202ENST00000530367 1156 ntBASIC17.14■□□□□ 0.33
SORCS3Q9UPU3 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.14■□□□□ 0.33
SORCS3Q9UPU3 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC17.14■□□□□ 0.33
SORCS3Q9UPU3 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC17.14■□□□□ 0.33
SORCS3Q9UPU3 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
SORCS3Q9UPU3 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.14■□□□□ 0.33
SORCS3Q9UPU3 AC008494.3-201ENST00000606615 944 ntBASIC17.14■□□□□ 0.33
SORCS3Q9UPU3 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.14■□□□□ 0.33
SORCS3Q9UPU3 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SORCS3Q9UPU3 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.14■□□□□ 0.33
SORCS3Q9UPU3 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.14■□□□□ 0.33
SORCS3Q9UPU3 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SORCS3Q9UPU3 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SORCS3Q9UPU3 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SORCS3Q9UPU3 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.14■□□□□ 0.33
SORCS3Q9UPU3 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SORCS3Q9UPU3 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.14■□□□□ 0.33
SORCS3Q9UPU3 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SORCS3Q9UPU3 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC17.14■□□□□ 0.33
SORCS3Q9UPU3 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SORCS3Q9UPU3 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
SORCS3Q9UPU3 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SORCS3Q9UPU3 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.13■□□□□ 0.33
SORCS3Q9UPU3 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC17.13■□□□□ 0.33
SORCS3Q9UPU3 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SORCS3Q9UPU3 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.13■□□□□ 0.33
SORCS3Q9UPU3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms