Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.52■□□□□ 0.71
ZC3H4Q9UPT8 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ZC3H4Q9UPT8 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ZC3H4Q9UPT8 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
ZC3H4Q9UPT8 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ZC3H4Q9UPT8 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
ZC3H4Q9UPT8 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ZC3H4Q9UPT8 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 AC134915.1-201ENST00000426461 574 ntBASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 UPF3AP2-201ENST00000457924 1132 ntBASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 KC6-205ENST00000599934 556 ntTSL 4 BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 PRKN-211ENST00000615065 261 ntTSL 5 BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 AC116353.5-201ENST00000638148 1699 ntBASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 RPL13P2-201ENST00000440687 659 ntBASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 AC104306.2-201ENST00000451877 341 ntBASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 BX284668.4-201ENST00000453917 508 ntBASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 ACTG1P17-201ENST00000558391 1119 ntBASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 ATF5-205ENST00000600336 682 ntTSL 2 BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 LARP4-220ENST00000615080 856 ntTSL 5 BASIC19.51■□□□□ 0.71
ZC3H4Q9UPT8 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZC3H4Q9UPT8 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZC3H4Q9UPT8 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
ZC3H4Q9UPT8 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ZC3H4Q9UPT8 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
ZC3H4Q9UPT8 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ZC3H4Q9UPT8 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZC3H4Q9UPT8 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
ZC3H4Q9UPT8 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZC3H4Q9UPT8 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.5■□□□□ 0.71
ZC3H4Q9UPT8 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.5■□□□□ 0.71
ZC3H4Q9UPT8 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
ZC3H4Q9UPT8 SNX33P1-201ENST00000592116 1762 ntBASIC19.5■□□□□ 0.71
ZC3H4Q9UPT8 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZC3H4Q9UPT8 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ZC3H4Q9UPT8 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZC3H4Q9UPT8 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZC3H4Q9UPT8 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ZC3H4Q9UPT8 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZC3H4Q9UPT8 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ZC3H4Q9UPT8 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ZC3H4Q9UPT8 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZC3H4Q9UPT8 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC19.5■□□□□ 0.71
ZC3H4Q9UPT8 GGCT-203ENST00000409144 836 ntTSL 2 BASIC19.5■□□□□ 0.71
ZC3H4Q9UPT8 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC19.5■□□□□ 0.71
ZC3H4Q9UPT8 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC19.5■□□□□ 0.71
ZC3H4Q9UPT8 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ZC3H4Q9UPT8 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZC3H4Q9UPT8 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC19.5■□□□□ 0.71
ZC3H4Q9UPT8 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC19.5■□□□□ 0.71
ZC3H4Q9UPT8 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ZC3H4Q9UPT8 AC124947.2-201ENST00000547118 1133 ntBASIC19.5■□□□□ 0.71
ZC3H4Q9UPT8 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC19.5■□□□□ 0.71
ZC3H4Q9UPT8 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC19.5■□□□□ 0.71
ZC3H4Q9UPT8 LINC01115-203ENST00000606068 577 ntBASIC19.5■□□□□ 0.71
ZC3H4Q9UPT8 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC19.5■□□□□ 0.71
ZC3H4Q9UPT8 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms