Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSR3Q9UNL2 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.6□□□□□ -0.07
SSR3Q9UNL2 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.6□□□□□ -0.07
SSR3Q9UNL2 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC14.6□□□□□ -0.07
SSR3Q9UNL2 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SSR3Q9UNL2 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SSR3Q9UNL2 LIN28AP1-201ENST00000429574 405 ntBASIC14.6□□□□□ -0.07
SSR3Q9UNL2 SNORA78-201ENST00000459373 127 ntBASIC14.6□□□□□ -0.07
SSR3Q9UNL2 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.6□□□□□ -0.07
SSR3Q9UNL2 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC14.6□□□□□ -0.07
SSR3Q9UNL2 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSR3Q9UNL2 AC011558.1-201ENST00000623459 338 ntBASIC14.6□□□□□ -0.07
SSR3Q9UNL2 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSR3Q9UNL2 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSR3Q9UNL2 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSR3Q9UNL2 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
SSR3Q9UNL2 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.6□□□□□ -0.07
SSR3Q9UNL2 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.6□□□□□ -0.07
SSR3Q9UNL2 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSR3Q9UNL2 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSR3Q9UNL2 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSR3Q9UNL2 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSR3Q9UNL2 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSR3Q9UNL2 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
SSR3Q9UNL2 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
SSR3Q9UNL2 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.59□□□□□ -0.07
SSR3Q9UNL2 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SSR3Q9UNL2 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
SSR3Q9UNL2 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSR3Q9UNL2 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSR3Q9UNL2 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SSR3Q9UNL2 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.59□□□□□ -0.07
SSR3Q9UNL2 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SSR3Q9UNL2 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SSR3Q9UNL2 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSR3Q9UNL2 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.59□□□□□ -0.07
SSR3Q9UNL2 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.59□□□□□ -0.07
SSR3Q9UNL2 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.59□□□□□ -0.07
SSR3Q9UNL2 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSR3Q9UNL2 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
SSR3Q9UNL2 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSR3Q9UNL2 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
SSR3Q9UNL2 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC14.59□□□□□ -0.07
SSR3Q9UNL2 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.59□□□□□ -0.07
SSR3Q9UNL2 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
SSR3Q9UNL2 AC067750.1-201ENST00000608826 6545 ntBASIC14.59□□□□□ -0.07
SSR3Q9UNL2 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSR3Q9UNL2 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC14.59□□□□□ -0.07
SSR3Q9UNL2 TSPY20P-201ENST00000450910 630 ntBASIC14.59□□□□□ -0.07
SSR3Q9UNL2 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC14.59□□□□□ -0.07
SSR3Q9UNL2 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC14.59□□□□□ -0.07
SSR3Q9UNL2 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
SSR3Q9UNL2 MIR4492-201ENST00000581627 80 ntBASIC14.59□□□□□ -0.07
SSR3Q9UNL2 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC14.59□□□□□ -0.07
SSR3Q9UNL2 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
SSR3Q9UNL2 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
SSR3Q9UNL2 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
SSR3Q9UNL2 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
SSR3Q9UNL2 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SSR3Q9UNL2 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSR3Q9UNL2 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSR3Q9UNL2 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
SSR3Q9UNL2 AC026748.1-201ENST00000624349 3251 ntBASIC14.59□□□□□ -0.07
SSR3Q9UNL2 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.59□□□□□ -0.07
SSR3Q9UNL2 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
SSR3Q9UNL2 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
SSR3Q9UNL2 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
SSR3Q9UNL2 LINC01101-201ENST00000622953 1884 ntBASIC14.59□□□□□ -0.07
SSR3Q9UNL2 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.59□□□□□ -0.07
SSR3Q9UNL2 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
SSR3Q9UNL2 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
SSR3Q9UNL2 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC14.58□□□□□ -0.07
SSR3Q9UNL2 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
SSR3Q9UNL2 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
SSR3Q9UNL2 AC023908.3-201ENST00000564211 3047 ntBASIC14.58□□□□□ -0.07
SSR3Q9UNL2 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.58□□□□□ -0.07
SSR3Q9UNL2 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
SSR3Q9UNL2 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.58□□□□□ -0.07
SSR3Q9UNL2 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSR3Q9UNL2 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
SSR3Q9UNL2 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSR3Q9UNL2 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
SSR3Q9UNL2 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
SSR3Q9UNL2 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SSR3Q9UNL2 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC14.58□□□□□ -0.08
SSR3Q9UNL2 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSR3Q9UNL2 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.58□□□□□ -0.08
SSR3Q9UNL2 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSR3Q9UNL2 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.58□□□□□ -0.08
SSR3Q9UNL2 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSR3Q9UNL2 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSR3Q9UNL2 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SSR3Q9UNL2 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC14.58□□□□□ -0.08
SSR3Q9UNL2 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
SSR3Q9UNL2 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC14.58□□□□□ -0.08
SSR3Q9UNL2 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SSR3Q9UNL2 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
SSR3Q9UNL2 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.58□□□□□ -0.08
SSR3Q9UNL2 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
SSR3Q9UNL2 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms