Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.33■□□□□ 0.69
CLIP2Q9UDT6 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC19.33■□□□□ 0.69
CLIP2Q9UDT6 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.33■□□□□ 0.69
CLIP2Q9UDT6 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.33■□□□□ 0.69
CLIP2Q9UDT6 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC19.33■□□□□ 0.69
CLIP2Q9UDT6 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
CLIP2Q9UDT6 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC19.33■□□□□ 0.69
CLIP2Q9UDT6 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC19.33■□□□□ 0.69
CLIP2Q9UDT6 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CLIP2Q9UDT6 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CLIP2Q9UDT6 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLIP2Q9UDT6 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CLIP2Q9UDT6 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLIP2Q9UDT6 MIR943-201ENST00000401286 94 ntBASIC19.33■□□□□ 0.68
CLIP2Q9UDT6 PP14571-201ENST00000404327 934 ntTSL 2 BASIC19.33■□□□□ 0.68
CLIP2Q9UDT6 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.33■□□□□ 0.68
CLIP2Q9UDT6 AC125807.1-201ENST00000483097 614 ntBASIC19.33■□□□□ 0.68
CLIP2Q9UDT6 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC19.33■□□□□ 0.68
CLIP2Q9UDT6 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC19.33■□□□□ 0.68
CLIP2Q9UDT6 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC19.33■□□□□ 0.68
CLIP2Q9UDT6 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC19.33■□□□□ 0.68
CLIP2Q9UDT6 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLIP2Q9UDT6 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC19.33■□□□□ 0.68
CLIP2Q9UDT6 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CLIP2Q9UDT6 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLIP2Q9UDT6 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.33■□□□□ 0.68
CLIP2Q9UDT6 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLIP2Q9UDT6 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLIP2Q9UDT6 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CLIP2Q9UDT6 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CLIP2Q9UDT6 AC132872.4-202ENST00000622924 2756 ntBASIC19.32■□□□□ 0.68
CLIP2Q9UDT6 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC19.32■□□□□ 0.68
CLIP2Q9UDT6 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CLIP2Q9UDT6 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLIP2Q9UDT6 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLIP2Q9UDT6 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC19.32■□□□□ 0.68
CLIP2Q9UDT6 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLIP2Q9UDT6 GCK-202ENST00000345378 2421 ntTSL 2 BASIC19.32■□□□□ 0.68
CLIP2Q9UDT6 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC19.32■□□□□ 0.68
CLIP2Q9UDT6 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.32■□□□□ 0.68
CLIP2Q9UDT6 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC19.32■□□□□ 0.68
CLIP2Q9UDT6 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
CLIP2Q9UDT6 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CLIP2Q9UDT6 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC19.32■□□□□ 0.68
CLIP2Q9UDT6 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLIP2Q9UDT6 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLIP2Q9UDT6 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC19.32■□□□□ 0.68
CLIP2Q9UDT6 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.32■□□□□ 0.68
CLIP2Q9UDT6 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLIP2Q9UDT6 AC107890.1-201ENST00000422478 521 ntBASIC19.32■□□□□ 0.68
CLIP2Q9UDT6 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.32■□□□□ 0.68
CLIP2Q9UDT6 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.32■□□□□ 0.68
CLIP2Q9UDT6 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC19.32■□□□□ 0.68
CLIP2Q9UDT6 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.32■□□□□ 0.68
CLIP2Q9UDT6 RARRES2P9-201ENST00000565168 469 ntBASIC19.32■□□□□ 0.68
CLIP2Q9UDT6 AC011467.4-201ENST00000594891 528 ntBASIC19.32■□□□□ 0.68
CLIP2Q9UDT6 SPTSSB-204ENST00000617024 1292 ntBASIC19.32■□□□□ 0.68
CLIP2Q9UDT6 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.32■□□□□ 0.68
CLIP2Q9UDT6 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CLIP2Q9UDT6 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLIP2Q9UDT6 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLIP2Q9UDT6 AL031731.1-201ENST00000642131 2094 ntBASIC19.32■□□□□ 0.68
CLIP2Q9UDT6 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC19.32■□□□□ 0.68
CLIP2Q9UDT6 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC19.32■□□□□ 0.68
CLIP2Q9UDT6 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
CLIP2Q9UDT6 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
CLIP2Q9UDT6 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLIP2Q9UDT6 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
CLIP2Q9UDT6 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CLIP2Q9UDT6 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLIP2Q9UDT6 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLIP2Q9UDT6 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLIP2Q9UDT6 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CLIP2Q9UDT6 CYP2T1P-202ENST00000641596 2535 ntBASIC19.31■□□□□ 0.68
CLIP2Q9UDT6 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.31■□□□□ 0.68
CLIP2Q9UDT6 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CLIP2Q9UDT6 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CLIP2Q9UDT6 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC19.31■□□□□ 0.68
CLIP2Q9UDT6 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CLIP2Q9UDT6 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC19.31■□□□□ 0.68
CLIP2Q9UDT6 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLIP2Q9UDT6 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC19.31■□□□□ 0.68
CLIP2Q9UDT6 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CLIP2Q9UDT6 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CLIP2Q9UDT6 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.31■□□□□ 0.68
CLIP2Q9UDT6 AC055876.3-201ENST00000431496 288 ntBASIC19.31■□□□□ 0.68
CLIP2Q9UDT6 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.31■□□□□ 0.68
CLIP2Q9UDT6 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.31■□□□□ 0.68
CLIP2Q9UDT6 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.31■□□□□ 0.68
CLIP2Q9UDT6 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.31■□□□□ 0.68
CLIP2Q9UDT6 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.31■□□□□ 0.68
CLIP2Q9UDT6 SPCS2P1-201ENST00000561636 679 ntBASIC19.31■□□□□ 0.68
CLIP2Q9UDT6 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.31■□□□□ 0.68
CLIP2Q9UDT6 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CLIP2Q9UDT6 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC19.31■□□□□ 0.68
CLIP2Q9UDT6 AC138649.4-201ENST00000612222 287 ntBASIC19.31■□□□□ 0.68
CLIP2Q9UDT6 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC19.31■□□□□ 0.68
CLIP2Q9UDT6 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19.31■□□□□ 0.68
CLIP2Q9UDT6 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC19.31■□□□□ 0.68
CLIP2Q9UDT6 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms