Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TLR9Q9NR96 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
TLR9Q9NR96 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TLR9Q9NR96 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TLR9Q9NR96 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TLR9Q9NR96 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.18■□□□□ 0.34
TLR9Q9NR96 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
TLR9Q9NR96 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TLR9Q9NR96 FO393414.2-201ENST00000405153 598 ntBASIC17.18■□□□□ 0.34
TLR9Q9NR96 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TLR9Q9NR96 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC17.18■□□□□ 0.34
TLR9Q9NR96 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TLR9Q9NR96 FAM8A2P-201ENST00000528813 1142 ntBASIC17.18■□□□□ 0.34
TLR9Q9NR96 SNX29P1-201ENST00000548357 1007 ntBASIC17.18■□□□□ 0.34
TLR9Q9NR96 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
TLR9Q9NR96 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.18■□□□□ 0.34
TLR9Q9NR96 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.18■□□□□ 0.34
TLR9Q9NR96 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
TLR9Q9NR96 RELA-227ENST00000615805 2236 ntTSL 5 BASIC17.18■□□□□ 0.34
TLR9Q9NR96 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.18■□□□□ 0.34
TLR9Q9NR96 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TLR9Q9NR96 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
TLR9Q9NR96 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TLR9Q9NR96 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.18■□□□□ 0.34
TLR9Q9NR96 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TLR9Q9NR96 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
TLR9Q9NR96 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TLR9Q9NR96 CDC14C-201ENST00000428251 1719 ntBASIC17.18■□□□□ 0.34
TLR9Q9NR96 GGT4P-201ENST00000623672 1708 ntBASIC17.18■□□□□ 0.34
TLR9Q9NR96 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
TLR9Q9NR96 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TLR9Q9NR96 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TLR9Q9NR96 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TLR9Q9NR96 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TLR9Q9NR96 AC022211.2-201ENST00000585075 2527 ntBASIC17.17■□□□□ 0.34
TLR9Q9NR96 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.17■□□□□ 0.34
TLR9Q9NR96 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
TLR9Q9NR96 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.17■□□□□ 0.34
TLR9Q9NR96 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TLR9Q9NR96 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TLR9Q9NR96 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TLR9Q9NR96 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.17■□□□□ 0.34
TLR9Q9NR96 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.17■□□□□ 0.34
TLR9Q9NR96 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.17■□□□□ 0.34
TLR9Q9NR96 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TLR9Q9NR96 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC17.17■□□□□ 0.34
TLR9Q9NR96 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TLR9Q9NR96 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
TLR9Q9NR96 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.17■□□□□ 0.34
TLR9Q9NR96 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
TLR9Q9NR96 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TLR9Q9NR96 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TLR9Q9NR96 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TLR9Q9NR96 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TLR9Q9NR96 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.17■□□□□ 0.34
TLR9Q9NR96 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TLR9Q9NR96 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TLR9Q9NR96 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TLR9Q9NR96 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC17.17■□□□□ 0.34
TLR9Q9NR96 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TLR9Q9NR96 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.17■□□□□ 0.34
TLR9Q9NR96 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TLR9Q9NR96 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TLR9Q9NR96 AL133338.1-201ENST00000565695 1517 ntBASIC17.16■□□□□ 0.34
TLR9Q9NR96 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TLR9Q9NR96 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TLR9Q9NR96 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TLR9Q9NR96 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TLR9Q9NR96 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC17.16■□□□□ 0.34
TLR9Q9NR96 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TLR9Q9NR96 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
TLR9Q9NR96 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
TLR9Q9NR96 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TLR9Q9NR96 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TLR9Q9NR96 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TLR9Q9NR96 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TLR9Q9NR96 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.16■□□□□ 0.34
TLR9Q9NR96 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
TLR9Q9NR96 RPF1-202ENST00000370656 724 ntTSL 2 BASIC17.16■□□□□ 0.34
TLR9Q9NR96 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
TLR9Q9NR96 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TLR9Q9NR96 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TLR9Q9NR96 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.16■□□□□ 0.34
TLR9Q9NR96 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.16■□□□□ 0.34
TLR9Q9NR96 AC092552.1-201ENST00000547243 906 ntBASIC17.16■□□□□ 0.34
TLR9Q9NR96 AC010319.3-201ENST00000597028 470 ntBASIC17.16■□□□□ 0.34
TLR9Q9NR96 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TLR9Q9NR96 AC068587.10-201ENST00000641210 219 ntBASIC17.16■□□□□ 0.34
TLR9Q9NR96 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TLR9Q9NR96 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TLR9Q9NR96 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TLR9Q9NR96 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TLR9Q9NR96 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TLR9Q9NR96 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.16■□□□□ 0.34
TLR9Q9NR96 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.16■□□□□ 0.34
TLR9Q9NR96 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TLR9Q9NR96 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TLR9Q9NR96 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TLR9Q9NR96 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
TLR9Q9NR96 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms