Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 MIR4469-201ENST00000583919 79 ntBASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 AC099522.2-201ENST00000607001 744 ntBASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NECTIN3Q9NQS3 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NECTIN3Q9NQS3 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
NECTIN3Q9NQS3 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NECTIN3Q9NQS3 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NECTIN3Q9NQS3 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.67■□□□□ 0.1
NECTIN3Q9NQS3 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NECTIN3Q9NQS3 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
NECTIN3Q9NQS3 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NECTIN3Q9NQS3 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NECTIN3Q9NQS3 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NECTIN3Q9NQS3 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.67■□□□□ 0.1
NECTIN3Q9NQS3 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
NECTIN3Q9NQS3 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.67■□□□□ 0.1
NECTIN3Q9NQS3 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.67■□□□□ 0.1
NECTIN3Q9NQS3 CEND1P1-201ENST00000451006 455 ntBASIC15.67■□□□□ 0.1
NECTIN3Q9NQS3 YBX1P5-201ENST00000509441 847 ntBASIC15.67■□□□□ 0.1
NECTIN3Q9NQS3 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
NECTIN3Q9NQS3 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
NECTIN3Q9NQS3 AC139530.3-201ENST00000620344 690 ntBASIC15.67■□□□□ 0.1
NECTIN3Q9NQS3 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
NECTIN3Q9NQS3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
NECTIN3Q9NQS3 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NECTIN3Q9NQS3 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
NECTIN3Q9NQS3 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
NECTIN3Q9NQS3 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NECTIN3Q9NQS3 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
NECTIN3Q9NQS3 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NECTIN3Q9NQS3 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.67■□□□□ 0.1
NECTIN3Q9NQS3 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.67■□□□□ 0.1
NECTIN3Q9NQS3 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
NECTIN3Q9NQS3 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.67■□□□□ 0.1
NECTIN3Q9NQS3 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
NECTIN3Q9NQS3 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.67■□□□□ 0.1
NECTIN3Q9NQS3 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
NECTIN3Q9NQS3 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NECTIN3Q9NQS3 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.67■□□□□ 0.1
NECTIN3Q9NQS3 ELL2P1-201ENST00000413990 1906 ntBASIC15.66■□□□□ 0.1
NECTIN3Q9NQS3 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
NECTIN3Q9NQS3 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.66■□□□□ 0.1
NECTIN3Q9NQS3 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NECTIN3Q9NQS3 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NECTIN3Q9NQS3 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
NECTIN3Q9NQS3 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
NECTIN3Q9NQS3 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NECTIN3Q9NQS3 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NECTIN3Q9NQS3 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NECTIN3Q9NQS3 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NECTIN3Q9NQS3 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
NECTIN3Q9NQS3 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NECTIN3Q9NQS3 AC092474.2-201ENST00000424288 719 ntBASIC15.66■□□□□ 0.1
NECTIN3Q9NQS3 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NECTIN3Q9NQS3 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC15.66■□□□□ 0.1
NECTIN3Q9NQS3 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NECTIN3Q9NQS3 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NECTIN3Q9NQS3 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
NECTIN3Q9NQS3 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.66■□□□□ 0.1
NECTIN3Q9NQS3 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.66■□□□□ 0.1
NECTIN3Q9NQS3 AC109635.5-201ENST00000533593 962 ntBASIC15.66■□□□□ 0.1
NECTIN3Q9NQS3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.66■□□□□ 0.1
NECTIN3Q9NQS3 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.66■□□□□ 0.1
NECTIN3Q9NQS3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NECTIN3Q9NQS3 AC006538.3-201ENST00000612495 578 ntBASIC15.66■□□□□ 0.1
NECTIN3Q9NQS3 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.66■□□□□ 0.1
NECTIN3Q9NQS3 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
NECTIN3Q9NQS3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NECTIN3Q9NQS3 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
NECTIN3Q9NQS3 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
NECTIN3Q9NQS3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NECTIN3Q9NQS3 KRT8P39-201ENST00000396270 1433 ntBASIC15.66■□□□□ 0.1
NECTIN3Q9NQS3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NECTIN3Q9NQS3 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.66■□□□□ 0.1
NECTIN3Q9NQS3 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.66■□□□□ 0.1
NECTIN3Q9NQS3 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
NECTIN3Q9NQS3 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NECTIN3Q9NQS3 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
NECTIN3Q9NQS3 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
NECTIN3Q9NQS3 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms