Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
VTA1Q9NP79 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VTA1Q9NP79 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VTA1Q9NP79 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.08■□□□□ 0.48
VTA1Q9NP79 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.08■□□□□ 0.48
VTA1Q9NP79 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.08■□□□□ 0.48
VTA1Q9NP79 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
VTA1Q9NP79 MIR6805-201ENST00000615055 62 ntBASIC18.08■□□□□ 0.48
VTA1Q9NP79 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
VTA1Q9NP79 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
VTA1Q9NP79 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VTA1Q9NP79 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VTA1Q9NP79 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VTA1Q9NP79 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
VTA1Q9NP79 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VTA1Q9NP79 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
VTA1Q9NP79 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
VTA1Q9NP79 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
VTA1Q9NP79 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
VTA1Q9NP79 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VTA1Q9NP79 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.07■□□□□ 0.48
VTA1Q9NP79 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.07■□□□□ 0.48
VTA1Q9NP79 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VTA1Q9NP79 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VTA1Q9NP79 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.07■□□□□ 0.48
VTA1Q9NP79 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.07■□□□□ 0.48
VTA1Q9NP79 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.07■□□□□ 0.48
VTA1Q9NP79 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VTA1Q9NP79 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VTA1Q9NP79 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.07■□□□□ 0.48
VTA1Q9NP79 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.07■□□□□ 0.48
VTA1Q9NP79 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VTA1Q9NP79 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VTA1Q9NP79 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
VTA1Q9NP79 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VTA1Q9NP79 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VTA1Q9NP79 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VTA1Q9NP79 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VTA1Q9NP79 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC18.07■□□□□ 0.48
VTA1Q9NP79 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
VTA1Q9NP79 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
VTA1Q9NP79 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VTA1Q9NP79 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.07■□□□□ 0.48
VTA1Q9NP79 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VTA1Q9NP79 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VTA1Q9NP79 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VTA1Q9NP79 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VTA1Q9NP79 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.07■□□□□ 0.48
VTA1Q9NP79 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.07■□□□□ 0.48
VTA1Q9NP79 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.07■□□□□ 0.48
VTA1Q9NP79 AC092552.1-201ENST00000547243 906 ntBASIC18.07■□□□□ 0.48
VTA1Q9NP79 LINC01115-203ENST00000606068 577 ntBASIC18.07■□□□□ 0.48
VTA1Q9NP79 AL391069.4-201ENST00000609583 481 ntBASIC18.07■□□□□ 0.48
VTA1Q9NP79 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.07■□□□□ 0.48
VTA1Q9NP79 AL033527.5-201ENST00000641382 801 ntBASIC18.07■□□□□ 0.48
VTA1Q9NP79 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
VTA1Q9NP79 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VTA1Q9NP79 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VTA1Q9NP79 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
VTA1Q9NP79 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
VTA1Q9NP79 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
VTA1Q9NP79 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
VTA1Q9NP79 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
VTA1Q9NP79 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.06■□□□□ 0.48
VTA1Q9NP79 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
VTA1Q9NP79 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VTA1Q9NP79 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.06■□□□□ 0.48
VTA1Q9NP79 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
VTA1Q9NP79 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VTA1Q9NP79 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VTA1Q9NP79 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VTA1Q9NP79 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC18.06■□□□□ 0.48
VTA1Q9NP79 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VTA1Q9NP79 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VTA1Q9NP79 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.06■□□□□ 0.48
VTA1Q9NP79 MIR1909-201ENST00000411312 80 ntBASIC18.06■□□□□ 0.48
VTA1Q9NP79 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
VTA1Q9NP79 HLA-V-201ENST00000429037 534 ntBASIC18.06■□□□□ 0.48
VTA1Q9NP79 RPL13P2-201ENST00000440687 659 ntBASIC18.06■□□□□ 0.48
VTA1Q9NP79 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
VTA1Q9NP79 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC18.06■□□□□ 0.48
VTA1Q9NP79 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.06■□□□□ 0.48
VTA1Q9NP79 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VTA1Q9NP79 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.06■□□□□ 0.48
VTA1Q9NP79 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
VTA1Q9NP79 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
VTA1Q9NP79 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
VTA1Q9NP79 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VTA1Q9NP79 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VTA1Q9NP79 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VTA1Q9NP79 PCDHB18P-201ENST00000524813 2368 ntBASIC18.06■□□□□ 0.48
VTA1Q9NP79 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VTA1Q9NP79 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
VTA1Q9NP79 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VTA1Q9NP79 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VTA1Q9NP79 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VTA1Q9NP79 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
VTA1Q9NP79 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
VTA1Q9NP79 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
VTA1Q9NP79 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms