Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
ATP13A1Q9HD20 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.68■□□□□ 0.26
ATP13A1Q9HD20 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATP13A1Q9HD20 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC16.68■□□□□ 0.26
ATP13A1Q9HD20 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
ATP13A1Q9HD20 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP13A1Q9HD20 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP13A1Q9HD20 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.68■□□□□ 0.26
ATP13A1Q9HD20 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP13A1Q9HD20 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
ATP13A1Q9HD20 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATP13A1Q9HD20 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
ATP13A1Q9HD20 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP13A1Q9HD20 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATP13A1Q9HD20 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.67■□□□□ 0.26
ATP13A1Q9HD20 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP13A1Q9HD20 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP13A1Q9HD20 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP13A1Q9HD20 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.67■□□□□ 0.26
ATP13A1Q9HD20 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
ATP13A1Q9HD20 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATP13A1Q9HD20 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP13A1Q9HD20 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.67■□□□□ 0.26
ATP13A1Q9HD20 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.67■□□□□ 0.26
ATP13A1Q9HD20 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.67■□□□□ 0.26
ATP13A1Q9HD20 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
ATP13A1Q9HD20 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
ATP13A1Q9HD20 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.67■□□□□ 0.26
ATP13A1Q9HD20 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP13A1Q9HD20 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
ATP13A1Q9HD20 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.67■□□□□ 0.26
ATP13A1Q9HD20 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.67■□□□□ 0.26
ATP13A1Q9HD20 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.67■□□□□ 0.26
ATP13A1Q9HD20 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
ATP13A1Q9HD20 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.67■□□□□ 0.26
ATP13A1Q9HD20 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.67■□□□□ 0.26
ATP13A1Q9HD20 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.67■□□□□ 0.26
ATP13A1Q9HD20 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.67■□□□□ 0.26
ATP13A1Q9HD20 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP13A1Q9HD20 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.67■□□□□ 0.26
ATP13A1Q9HD20 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.67■□□□□ 0.26
ATP13A1Q9HD20 AC003101.2-201ENST00000612557 442 ntBASIC16.67■□□□□ 0.26
ATP13A1Q9HD20 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP13A1Q9HD20 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP13A1Q9HD20 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATP13A1Q9HD20 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.67■□□□□ 0.26
ATP13A1Q9HD20 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
ATP13A1Q9HD20 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.67■□□□□ 0.26
ATP13A1Q9HD20 REXO1L8P-201ENST00000604378 1897 ntBASIC16.67■□□□□ 0.26
ATP13A1Q9HD20 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP13A1Q9HD20 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.67■□□□□ 0.26
ATP13A1Q9HD20 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP13A1Q9HD20 AC026691.1-201ENST00000602502 2017 ntBASIC16.67■□□□□ 0.26
ATP13A1Q9HD20 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATP13A1Q9HD20 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.67■□□□□ 0.26
ATP13A1Q9HD20 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
ATP13A1Q9HD20 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
ATP13A1Q9HD20 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP13A1Q9HD20 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP13A1Q9HD20 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.66■□□□□ 0.26
ATP13A1Q9HD20 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATP13A1Q9HD20 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP13A1Q9HD20 DOC2GP-204ENST00000639052 2548 ntBASIC16.66■□□□□ 0.26
ATP13A1Q9HD20 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP13A1Q9HD20 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.66■□□□□ 0.26
ATP13A1Q9HD20 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
ATP13A1Q9HD20 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP13A1Q9HD20 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP13A1Q9HD20 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP13A1Q9HD20 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATP13A1Q9HD20 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP13A1Q9HD20 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP13A1Q9HD20 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATP13A1Q9HD20 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP13A1Q9HD20 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATP13A1Q9HD20 AC067863.1-201ENST00000494933 530 ntBASIC16.66■□□□□ 0.26
ATP13A1Q9HD20 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC16.66■□□□□ 0.26
ATP13A1Q9HD20 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
ATP13A1Q9HD20 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.66■□□□□ 0.26
ATP13A1Q9HD20 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.66■□□□□ 0.26
ATP13A1Q9HD20 RFPL4AP1-201ENST00000530883 850 ntBASIC16.66■□□□□ 0.26
ATP13A1Q9HD20 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.66■□□□□ 0.26
ATP13A1Q9HD20 MIR4453-201ENST00000584019 89 ntBASIC16.66■□□□□ 0.26
ATP13A1Q9HD20 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATP13A1Q9HD20 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.66■□□□□ 0.26
ATP13A1Q9HD20 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATP13A1Q9HD20 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATP13A1Q9HD20 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP13A1Q9HD20 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.66■□□□□ 0.26
ATP13A1Q9HD20 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP13A1Q9HD20 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATP13A1Q9HD20 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP13A1Q9HD20 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP13A1Q9HD20 TUBB3P1-201ENST00000405796 1332 ntBASIC16.66■□□□□ 0.26
ATP13A1Q9HD20 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
ATP13A1Q9HD20 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.66■□□□□ 0.26
ATP13A1Q9HD20 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
ATP13A1Q9HD20 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
ATP13A1Q9HD20 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATP13A1Q9HD20 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms