Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 HCG4B-203ENST00000450128 991 ntBASIC15.71■□□□□ 0.11
LRTM1Q9HBL6 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.71■□□□□ 0.11
LRTM1Q9HBL6 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
LRTM1Q9HBL6 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.71■□□□□ 0.11
LRTM1Q9HBL6 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.71■□□□□ 0.11
LRTM1Q9HBL6 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.71■□□□□ 0.11
LRTM1Q9HBL6 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC15.71■□□□□ 0.11
LRTM1Q9HBL6 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRTM1Q9HBL6 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC15.71■□□□□ 0.11
LRTM1Q9HBL6 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC15.71■□□□□ 0.11
LRTM1Q9HBL6 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC15.71■□□□□ 0.11
LRTM1Q9HBL6 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LRTM1Q9HBL6 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
LRTM1Q9HBL6 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRTM1Q9HBL6 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.71■□□□□ 0.11
LRTM1Q9HBL6 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRTM1Q9HBL6 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.71■□□□□ 0.11
LRTM1Q9HBL6 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.71■□□□□ 0.11
LRTM1Q9HBL6 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC15.71■□□□□ 0.11
LRTM1Q9HBL6 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRTM1Q9HBL6 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
LRTM1Q9HBL6 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
LRTM1Q9HBL6 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
LRTM1Q9HBL6 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
LRTM1Q9HBL6 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.71■□□□□ 0.1
LRTM1Q9HBL6 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRTM1Q9HBL6 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
LRTM1Q9HBL6 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRTM1Q9HBL6 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRTM1Q9HBL6 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRTM1Q9HBL6 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.7■□□□□ 0.1
LRTM1Q9HBL6 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRTM1Q9HBL6 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.7■□□□□ 0.1
LRTM1Q9HBL6 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LRTM1Q9HBL6 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRTM1Q9HBL6 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRTM1Q9HBL6 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.7■□□□□ 0.1
LRTM1Q9HBL6 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.7■□□□□ 0.1
LRTM1Q9HBL6 RNA5SP415-201ENST00000517246 115 ntBASIC15.7■□□□□ 0.1
LRTM1Q9HBL6 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
LRTM1Q9HBL6 AC096734.2-201ENST00000562054 433 ntBASIC15.7■□□□□ 0.1
LRTM1Q9HBL6 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC15.7■□□□□ 0.1
LRTM1Q9HBL6 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.7■□□□□ 0.1
LRTM1Q9HBL6 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
LRTM1Q9HBL6 AC010507.1-201ENST00000633895 436 ntBASIC15.7■□□□□ 0.1
LRTM1Q9HBL6 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.7■□□□□ 0.1
LRTM1Q9HBL6 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRTM1Q9HBL6 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.7■□□□□ 0.1
LRTM1Q9HBL6 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRTM1Q9HBL6 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
LRTM1Q9HBL6 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRTM1Q9HBL6 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LRTM1Q9HBL6 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
LRTM1Q9HBL6 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRTM1Q9HBL6 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.7■□□□□ 0.1
LRTM1Q9HBL6 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRTM1Q9HBL6 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LRTM1Q9HBL6 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
LRTM1Q9HBL6 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
LRTM1Q9HBL6 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.7■□□□□ 0.1
LRTM1Q9HBL6 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
LRTM1Q9HBL6 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.7■□□□□ 0.1
LRTM1Q9HBL6 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.7■□□□□ 0.1
LRTM1Q9HBL6 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRTM1Q9HBL6 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
LRTM1Q9HBL6 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.69■□□□□ 0.1
LRTM1Q9HBL6 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
LRTM1Q9HBL6 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.69■□□□□ 0.1
LRTM1Q9HBL6 AC109635.5-201ENST00000533593 962 ntBASIC15.69■□□□□ 0.1
LRTM1Q9HBL6 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.69■□□□□ 0.1
LRTM1Q9HBL6 AP001005.1-201ENST00000571755 1248 ntBASIC15.69■□□□□ 0.1
LRTM1Q9HBL6 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.1
LRTM1Q9HBL6 AL009183.1-201ENST00000603760 355 ntBASIC15.69■□□□□ 0.1
LRTM1Q9HBL6 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC15.69■□□□□ 0.1
LRTM1Q9HBL6 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.69■□□□□ 0.1
LRTM1Q9HBL6 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
LRTM1Q9HBL6 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRTM1Q9HBL6 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC15.69■□□□□ 0.1
LRTM1Q9HBL6 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRTM1Q9HBL6 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRTM1Q9HBL6 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
LRTM1Q9HBL6 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.69■□□□□ 0.1
LRTM1Q9HBL6 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
LRTM1Q9HBL6 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRTM1Q9HBL6 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRTM1Q9HBL6 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
LRTM1Q9HBL6 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.68■□□□□ 0.1
LRTM1Q9HBL6 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC15.68■□□□□ 0.1
LRTM1Q9HBL6 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRTM1Q9HBL6 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRTM1Q9HBL6 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRTM1Q9HBL6 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.68■□□□□ 0.1
LRTM1Q9HBL6 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
LRTM1Q9HBL6 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.68■□□□□ 0.1
LRTM1Q9HBL6 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRTM1Q9HBL6 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
LRTM1Q9HBL6 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LRTM1Q9HBL6 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
LRTM1Q9HBL6 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC15.68■□□□□ 0.1
LRTM1Q9HBL6 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms