Protein–RNA interactions for Protein: Q9H5V8

CDCP1, CUB domain-containing protein 1, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1Q9H5V8 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDCP1Q9H5V8 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CDCP1Q9H5V8 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDCP1Q9H5V8 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDCP1Q9H5V8 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDCP1Q9H5V8 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDCP1Q9H5V8 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDCP1Q9H5V8 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDCP1Q9H5V8 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.25■□□□□ 0.03
CDCP1Q9H5V8 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.25■□□□□ 0.03
CDCP1Q9H5V8 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDCP1Q9H5V8 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.25■□□□□ 0.03
CDCP1Q9H5V8 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.25■□□□□ 0.03
CDCP1Q9H5V8 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.25■□□□□ 0.03
CDCP1Q9H5V8 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.25■□□□□ 0.03
CDCP1Q9H5V8 DUX4L27-201ENST00000554796 1261 ntBASIC15.25■□□□□ 0.03
CDCP1Q9H5V8 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC15.25■□□□□ 0.03
CDCP1Q9H5V8 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.25■□□□□ 0.03
CDCP1Q9H5V8 AC015911.4-201ENST00000588022 1070 ntBASIC15.25■□□□□ 0.03
CDCP1Q9H5V8 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDCP1Q9H5V8 AC073389.1-201ENST00000595595 795 ntBASIC15.25■□□□□ 0.03
CDCP1Q9H5V8 MIR6080-201ENST00000617359 66 ntBASIC15.25■□□□□ 0.03
CDCP1Q9H5V8 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDCP1Q9H5V8 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.25■□□□□ 0.03
CDCP1Q9H5V8 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDCP1Q9H5V8 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDCP1Q9H5V8 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.25■□□□□ 0.03
CDCP1Q9H5V8 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CDCP1Q9H5V8 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.25■□□□□ 0.03
CDCP1Q9H5V8 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDCP1Q9H5V8 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.25■□□□□ 0.03
CDCP1Q9H5V8 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDCP1Q9H5V8 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CDCP1Q9H5V8 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDCP1Q9H5V8 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CDCP1Q9H5V8 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CDCP1Q9H5V8 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDCP1Q9H5V8 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CDCP1Q9H5V8 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDCP1Q9H5V8 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDCP1Q9H5V8 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.24■□□□□ 0.03
CDCP1Q9H5V8 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.24■□□□□ 0.03
CDCP1Q9H5V8 AC073439.1-201ENST00000624121 1774 ntBASIC15.24■□□□□ 0.03
CDCP1Q9H5V8 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
CDCP1Q9H5V8 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.24■□□□□ 0.03
CDCP1Q9H5V8 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.24■□□□□ 0.03
CDCP1Q9H5V8 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
CDCP1Q9H5V8 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.24■□□□□ 0.03
CDCP1Q9H5V8 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC15.24■□□□□ 0.03
CDCP1Q9H5V8 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CDCP1Q9H5V8 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.24■□□□□ 0.03
CDCP1Q9H5V8 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDCP1Q9H5V8 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDCP1Q9H5V8 AC142381.1-201ENST00000426099 345 ntBASIC15.24■□□□□ 0.03
CDCP1Q9H5V8 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.24■□□□□ 0.03
CDCP1Q9H5V8 QPRT-203ENST00000562473 579 ntTSL 3 BASIC15.24■□□□□ 0.03
CDCP1Q9H5V8 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.24■□□□□ 0.03
CDCP1Q9H5V8 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.24■□□□□ 0.03
CDCP1Q9H5V8 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.24■□□□□ 0.03
CDCP1Q9H5V8 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CDCP1Q9H5V8 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CDCP1Q9H5V8 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CDCP1Q9H5V8 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CDCP1Q9H5V8 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.24■□□□□ 0.03
CDCP1Q9H5V8 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CDCP1Q9H5V8 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC15.24■□□□□ 0.03
CDCP1Q9H5V8 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.24■□□□□ 0.03
CDCP1Q9H5V8 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDCP1Q9H5V8 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDCP1Q9H5V8 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CDCP1Q9H5V8 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.24■□□□□ 0.03
CDCP1Q9H5V8 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDCP1Q9H5V8 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CDCP1Q9H5V8 AP3S2-216ENST00000617003 1561 ntBASIC15.24■□□□□ 0.03
CDCP1Q9H5V8 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CDCP1Q9H5V8 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CDCP1Q9H5V8 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDCP1Q9H5V8 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDCP1Q9H5V8 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDCP1Q9H5V8 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.23■□□□□ 0.03
CDCP1Q9H5V8 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.23■□□□□ 0.03
CDCP1Q9H5V8 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.23■□□□□ 0.03
CDCP1Q9H5V8 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDCP1Q9H5V8 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.23■□□□□ 0.03
CDCP1Q9H5V8 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.23■□□□□ 0.03
CDCP1Q9H5V8 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDCP1Q9H5V8 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.23■□□□□ 0.03
CDCP1Q9H5V8 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDCP1Q9H5V8 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC15.23■□□□□ 0.03
CDCP1Q9H5V8 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CDCP1Q9H5V8 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDCP1Q9H5V8 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDCP1Q9H5V8 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CDCP1Q9H5V8 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CDCP1Q9H5V8 KLF2P3-201ENST00000451977 1087 ntBASIC15.23■□□□□ 0.03
CDCP1Q9H5V8 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.23■□□□□ 0.03
CDCP1Q9H5V8 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.23■□□□□ 0.03
CDCP1Q9H5V8 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CDCP1Q9H5V8 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.23■□□□□ 0.03
CDCP1Q9H5V8 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms