Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TUBB1Q9H4B7 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBB1Q9H4B7 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.7■□□□□ 0.1
TUBB1Q9H4B7 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBB1Q9H4B7 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBB1Q9H4B7 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBB1Q9H4B7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TUBB1Q9H4B7 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBB1Q9H4B7 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.7■□□□□ 0.1
TUBB1Q9H4B7 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.7■□□□□ 0.1
TUBB1Q9H4B7 MRPL3P1-201ENST00000400109 1033 ntBASIC15.7■□□□□ 0.1
TUBB1Q9H4B7 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC15.7■□□□□ 0.1
TUBB1Q9H4B7 CRYGEP-201ENST00000412192 528 ntBASIC15.7■□□□□ 0.1
TUBB1Q9H4B7 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TUBB1Q9H4B7 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.7■□□□□ 0.1
TUBB1Q9H4B7 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.7■□□□□ 0.1
TUBB1Q9H4B7 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.7■□□□□ 0.1
TUBB1Q9H4B7 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TUBB1Q9H4B7 RNA5SP415-201ENST00000517246 115 ntBASIC15.7■□□□□ 0.1
TUBB1Q9H4B7 IGHV3-22-201ENST00000520721 359 ntBASIC15.7■□□□□ 0.1
TUBB1Q9H4B7 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.7■□□□□ 0.1
TUBB1Q9H4B7 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TUBB1Q9H4B7 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.7■□□□□ 0.1
TUBB1Q9H4B7 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.7■□□□□ 0.1
TUBB1Q9H4B7 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC15.7■□□□□ 0.1
TUBB1Q9H4B7 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBB1Q9H4B7 CICP13-201ENST00000422015 2789 ntBASIC15.7■□□□□ 0.1
TUBB1Q9H4B7 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.7■□□□□ 0.1
TUBB1Q9H4B7 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBB1Q9H4B7 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.7■□□□□ 0.1
TUBB1Q9H4B7 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBB1Q9H4B7 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBB1Q9H4B7 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBB1Q9H4B7 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
TUBB1Q9H4B7 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TUBB1Q9H4B7 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.7■□□□□ 0.1
TUBB1Q9H4B7 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
TUBB1Q9H4B7 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TUBB1Q9H4B7 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.7■□□□□ 0.1
TUBB1Q9H4B7 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.7■□□□□ 0.1
TUBB1Q9H4B7 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 AC020658.6-201ENST00000623564 1870 ntBASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 AL078644.1-201ENST00000609881 752 ntBASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 AC073439.1-201ENST00000624121 1774 ntBASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TUBB1Q9H4B7 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBB1Q9H4B7 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBB1Q9H4B7 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.68■□□□□ 0.1
TUBB1Q9H4B7 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.68■□□□□ 0.1
TUBB1Q9H4B7 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TUBB1Q9H4B7 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TUBB1Q9H4B7 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TUBB1Q9H4B7 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBB1Q9H4B7 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TUBB1Q9H4B7 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBB1Q9H4B7 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBB1Q9H4B7 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
TUBB1Q9H4B7 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms