Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC17.01■□□□□ 0.31
SMOQ99835 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMOQ99835 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMOQ99835 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SMOQ99835 KRT8P12-202ENST00000472924 1397 ntBASIC17.01■□□□□ 0.31
SMOQ99835 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.01■□□□□ 0.31
SMOQ99835 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SMOQ99835 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SMOQ99835 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.01■□□□□ 0.31
SMOQ99835 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17■□□□□ 0.31
SMOQ99835 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17■□□□□ 0.31
SMOQ99835 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17■□□□□ 0.31
SMOQ99835 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
SMOQ99835 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMOQ99835 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMOQ99835 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17■□□□□ 0.31
SMOQ99835 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
SMOQ99835 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17■□□□□ 0.31
SMOQ99835 PGR-209ENST00000617858 2816 ntTSL 5 BASIC17■□□□□ 0.31
SMOQ99835 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMOQ99835 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMOQ99835 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17■□□□□ 0.31
SMOQ99835 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMOQ99835 HNRNPA3P1-201ENST00000401429 1139 ntBASIC17■□□□□ 0.31
SMOQ99835 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17■□□□□ 0.31
SMOQ99835 HNRNPA3P5-201ENST00000455201 833 ntBASIC17■□□□□ 0.31
SMOQ99835 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMOQ99835 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17■□□□□ 0.31
SMOQ99835 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17■□□□□ 0.31
SMOQ99835 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17■□□□□ 0.31
SMOQ99835 AL844908.2-201ENST00000609461 460 ntBASIC17■□□□□ 0.31
SMOQ99835 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
SMOQ99835 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17■□□□□ 0.31
SMOQ99835 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC17■□□□□ 0.31
SMOQ99835 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMOQ99835 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
SMOQ99835 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17■□□□□ 0.31
SMOQ99835 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SMOQ99835 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17■□□□□ 0.31
SMOQ99835 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17■□□□□ 0.31
SMOQ99835 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SMOQ99835 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SMOQ99835 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.99■□□□□ 0.31
SMOQ99835 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.99■□□□□ 0.31
SMOQ99835 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SMOQ99835 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SMOQ99835 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMOQ99835 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
SMOQ99835 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.99■□□□□ 0.31
SMOQ99835 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMOQ99835 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMOQ99835 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMOQ99835 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.99■□□□□ 0.31
SMOQ99835 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SMOQ99835 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SMOQ99835 MRPS18AP1-201ENST00000414458 589 ntBASIC16.99■□□□□ 0.31
SMOQ99835 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.99■□□□□ 0.31
SMOQ99835 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.99■□□□□ 0.31
SMOQ99835 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.99■□□□□ 0.31
SMOQ99835 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.99■□□□□ 0.31
SMOQ99835 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.99■□□□□ 0.31
SMOQ99835 INGX-202ENST00000489074 768 ntBASIC16.99■□□□□ 0.31
SMOQ99835 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SMOQ99835 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.99■□□□□ 0.31
SMOQ99835 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.99■□□□□ 0.31
SMOQ99835 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.99■□□□□ 0.31
SMOQ99835 PRR29-209ENST00000582540 967 ntTSL 2 BASIC16.99■□□□□ 0.31
SMOQ99835 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SMOQ99835 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.99■□□□□ 0.31
SMOQ99835 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMOQ99835 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SMOQ99835 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMOQ99835 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.99■□□□□ 0.31
SMOQ99835 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.99■□□□□ 0.31
SMOQ99835 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC16.99■□□□□ 0.31
SMOQ99835 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
SMOQ99835 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMOQ99835 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SMOQ99835 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMOQ99835 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SMOQ99835 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.99■□□□□ 0.31
SMOQ99835 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.99■□□□□ 0.31
SMOQ99835 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
SMOQ99835 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
SMOQ99835 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMOQ99835 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.98■□□□□ 0.31
SMOQ99835 AC087499.5-201ENST00000452760 1342 ntBASIC16.98■□□□□ 0.31
SMOQ99835 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SMOQ99835 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.98■□□□□ 0.31
SMOQ99835 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMOQ99835 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMOQ99835 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMOQ99835 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMOQ99835 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SMOQ99835 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMOQ99835 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
SMOQ99835 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMOQ99835 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.98■□□□□ 0.31
SMOQ99835 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SMOQ99835 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms