Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV9Q99603 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV9Q99603 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC12.74□□□□□ -0.37
TRGV9Q99603 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
TRGV9Q99603 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV9Q99603 DKFZP434H168-201ENST00000567381 1905 ntBASIC12.74□□□□□ -0.37
TRGV9Q99603 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
TRGV9Q99603 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC12.74□□□□□ -0.37
TRGV9Q99603 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV9Q99603 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV9Q99603 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV9Q99603 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
TRGV9Q99603 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TRGV9Q99603 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC12.74□□□□□ -0.37
TRGV9Q99603 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV9Q99603 PRAL-201ENST00000624952 3286 ntBASIC12.73□□□□□ -0.37
TRGV9Q99603 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
TRGV9Q99603 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC12.73□□□□□ -0.37
TRGV9Q99603 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC12.73□□□□□ -0.37
TRGV9Q99603 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
TRGV9Q99603 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV9Q99603 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV9Q99603 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV9Q99603 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV9Q99603 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC12.73□□□□□ -0.37
TRGV9Q99603 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV9Q99603 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
TRGV9Q99603 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
TRGV9Q99603 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
TRGV9Q99603 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV9Q99603 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV9Q99603 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
TRGV9Q99603 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV9Q99603 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC12.73□□□□□ -0.37
TRGV9Q99603 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
TRGV9Q99603 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV9Q99603 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV9Q99603 PRSS29P-201ENST00000440800 595 ntBASIC12.73□□□□□ -0.37
TRGV9Q99603 SDHD-206ENST00000528182 754 ntTSL 3 BASIC12.73□□□□□ -0.37
TRGV9Q99603 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC12.73□□□□□ -0.37
TRGV9Q99603 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV9Q99603 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV9Q99603 BMF-207ENST00000559701 630 ntTSL 3 BASIC12.73□□□□□ -0.37
TRGV9Q99603 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC12.73□□□□□ -0.37
TRGV9Q99603 IFNL4P1-201ENST00000607083 540 ntBASIC12.73□□□□□ -0.37
TRGV9Q99603 AL365330.1-201ENST00000607459 531 ntBASIC12.73□□□□□ -0.37
TRGV9Q99603 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
TRGV9Q99603 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
TRGV9Q99603 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC12.73□□□□□ -0.37
TRGV9Q99603 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
TRGV9Q99603 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
TRGV9Q99603 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV9Q99603 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC12.73□□□□□ -0.37
TRGV9Q99603 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV9Q99603 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV9Q99603 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV9Q99603 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV9Q99603 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV9Q99603 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV9Q99603 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV9Q99603 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
TRGV9Q99603 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC12.73□□□□□ -0.37
TRGV9Q99603 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
TRGV9Q99603 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TRGV9Q99603 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV9Q99603 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
TRGV9Q99603 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV9Q99603 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC12.72□□□□□ -0.37
TRGV9Q99603 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
TRGV9Q99603 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV9Q99603 CASK-202ENST00000378158 3848 ntTSL 5 BASIC12.72□□□□□ -0.37
TRGV9Q99603 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV9Q99603 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
TRGV9Q99603 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV9Q99603 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC12.72□□□□□ -0.37
TRGV9Q99603 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
TRGV9Q99603 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV9Q99603 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
TRGV9Q99603 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC12.72□□□□□ -0.37
TRGV9Q99603 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV9Q99603 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV9Q99603 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV9Q99603 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC12.72□□□□□ -0.37
TRGV9Q99603 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV9Q99603 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC12.72□□□□□ -0.37
TRGV9Q99603 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC12.72□□□□□ -0.37
TRGV9Q99603 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC12.72□□□□□ -0.37
TRGV9Q99603 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV9Q99603 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
TRGV9Q99603 TOLLIP-AS1-201ENST00000530897 939 ntBASIC12.72□□□□□ -0.37
TRGV9Q99603 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC12.72□□□□□ -0.37
TRGV9Q99603 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC12.72□□□□□ -0.37
TRGV9Q99603 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC12.72□□□□□ -0.37
TRGV9Q99603 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
TRGV9Q99603 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV9Q99603 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV9Q99603 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
TRGV9Q99603 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC12.72□□□□□ -0.37
TRGV9Q99603 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TRGV9Q99603 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms