Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NOTCH4Q99466 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.52■□□□□ 0.24
NOTCH4Q99466 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NOTCH4Q99466 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NOTCH4Q99466 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
NOTCH4Q99466 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NOTCH4Q99466 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.52■□□□□ 0.24
NOTCH4Q99466 FLJ38576-201ENST00000623820 2459 ntBASIC16.52■□□□□ 0.24
NOTCH4Q99466 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NOTCH4Q99466 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NOTCH4Q99466 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.52■□□□□ 0.23
NOTCH4Q99466 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NOTCH4Q99466 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NOTCH4Q99466 AC093525.8-201ENST00000624099 1342 ntBASIC16.52■□□□□ 0.23
NOTCH4Q99466 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.52■□□□□ 0.23
NOTCH4Q99466 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NOTCH4Q99466 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.52■□□□□ 0.23
NOTCH4Q99466 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.52■□□□□ 0.23
NOTCH4Q99466 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NOTCH4Q99466 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC16.52■□□□□ 0.23
NOTCH4Q99466 MIR4525-201ENST00000580000 75 ntBASIC16.52■□□□□ 0.23
NOTCH4Q99466 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.52■□□□□ 0.23
NOTCH4Q99466 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NOTCH4Q99466 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NOTCH4Q99466 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NOTCH4Q99466 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NOTCH4Q99466 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NOTCH4Q99466 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NOTCH4Q99466 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NOTCH4Q99466 AC022211.2-201ENST00000585075 2527 ntBASIC16.51■□□□□ 0.23
NOTCH4Q99466 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.51■□□□□ 0.23
NOTCH4Q99466 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.51■□□□□ 0.23
NOTCH4Q99466 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NOTCH4Q99466 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NOTCH4Q99466 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.51■□□□□ 0.23
NOTCH4Q99466 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NOTCH4Q99466 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NOTCH4Q99466 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.51■□□□□ 0.23
NOTCH4Q99466 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.51■□□□□ 0.23
NOTCH4Q99466 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.51■□□□□ 0.23
NOTCH4Q99466 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC16.51■□□□□ 0.23
NOTCH4Q99466 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.51■□□□□ 0.23
NOTCH4Q99466 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.51■□□□□ 0.23
NOTCH4Q99466 TDH-203ENST00000531764 1110 ntBASIC16.51■□□□□ 0.23
NOTCH4Q99466 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.51■□□□□ 0.23
NOTCH4Q99466 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.51■□□□□ 0.23
NOTCH4Q99466 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.51■□□□□ 0.23
NOTCH4Q99466 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
NOTCH4Q99466 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NOTCH4Q99466 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NOTCH4Q99466 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NOTCH4Q99466 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
NOTCH4Q99466 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NOTCH4Q99466 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
NOTCH4Q99466 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NOTCH4Q99466 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
NOTCH4Q99466 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
NOTCH4Q99466 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NOTCH4Q99466 AC134407.2-201ENST00000625089 1978 ntBASIC16.51■□□□□ 0.23
NOTCH4Q99466 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
NOTCH4Q99466 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
NOTCH4Q99466 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.51■□□□□ 0.23
NOTCH4Q99466 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
NOTCH4Q99466 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.5■□□□□ 0.23
NOTCH4Q99466 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NOTCH4Q99466 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NOTCH4Q99466 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.5■□□□□ 0.23
NOTCH4Q99466 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
NOTCH4Q99466 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NOTCH4Q99466 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NOTCH4Q99466 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NOTCH4Q99466 MPV17-206ENST00000402722 827 ntTSL 3 BASIC16.5■□□□□ 0.23
NOTCH4Q99466 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.5■□□□□ 0.23
NOTCH4Q99466 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.5■□□□□ 0.23
NOTCH4Q99466 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.5■□□□□ 0.23
NOTCH4Q99466 PTP4A1P2-201ENST00000546033 454 ntBASIC16.5■□□□□ 0.23
NOTCH4Q99466 AL583810.1-201ENST00000553344 1045 ntBASIC16.5■□□□□ 0.23
NOTCH4Q99466 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16.5■□□□□ 0.23
NOTCH4Q99466 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.5■□□□□ 0.23
NOTCH4Q99466 BTNL10-201ENST00000595971 695 ntBASIC16.5■□□□□ 0.23
NOTCH4Q99466 AL022328.1-201ENST00000610050 478 ntBASIC16.5■□□□□ 0.23
NOTCH4Q99466 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NOTCH4Q99466 MSTO2P-201ENST00000314835 1709 ntBASIC16.5■□□□□ 0.23
NOTCH4Q99466 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.5■□□□□ 0.23
NOTCH4Q99466 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
NOTCH4Q99466 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NOTCH4Q99466 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NOTCH4Q99466 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NOTCH4Q99466 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.5■□□□□ 0.23
NOTCH4Q99466 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NOTCH4Q99466 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.5■□□□□ 0.23
NOTCH4Q99466 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NOTCH4Q99466 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.5■□□□□ 0.23
NOTCH4Q99466 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
NOTCH4Q99466 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NOTCH4Q99466 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.5■□□□□ 0.23
NOTCH4Q99466 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NOTCH4Q99466 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.5■□□□□ 0.23
NOTCH4Q99466 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
NOTCH4Q99466 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms