Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.5■□□□□ 0.23
PHOX2BQ99453 SLC25A47P1-201ENST00000531577 414 ntBASIC16.5■□□□□ 0.23
PHOX2BQ99453 ACTG1P17-201ENST00000558391 1119 ntBASIC16.5■□□□□ 0.23
PHOX2BQ99453 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.5■□□□□ 0.23
PHOX2BQ99453 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.5■□□□□ 0.23
PHOX2BQ99453 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PHOX2BQ99453 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.5■□□□□ 0.23
PHOX2BQ99453 AC004461.2-201ENST00000629517 803 ntBASIC16.5■□□□□ 0.23
PHOX2BQ99453 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PHOX2BQ99453 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.5■□□□□ 0.23
PHOX2BQ99453 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC16.5■□□□□ 0.23
PHOX2BQ99453 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PHOX2BQ99453 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.5■□□□□ 0.23
PHOX2BQ99453 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
PHOX2BQ99453 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PHOX2BQ99453 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PHOX2BQ99453 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PHOX2BQ99453 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.5■□□□□ 0.23
PHOX2BQ99453 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PHOX2BQ99453 FLJ13224-201ENST00000313737 1514 ntBASIC16.5■□□□□ 0.23
PHOX2BQ99453 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PHOX2BQ99453 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PHOX2BQ99453 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PHOX2BQ99453 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.49■□□□□ 0.23
PHOX2BQ99453 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.49■□□□□ 0.23
PHOX2BQ99453 AD000864.1-201ENST00000624076 2295 ntBASIC16.49■□□□□ 0.23
PHOX2BQ99453 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PHOX2BQ99453 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PHOX2BQ99453 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.49■□□□□ 0.23
PHOX2BQ99453 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PHOX2BQ99453 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
PHOX2BQ99453 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PHOX2BQ99453 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PHOX2BQ99453 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.49■□□□□ 0.23
PHOX2BQ99453 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PHOX2BQ99453 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PHOX2BQ99453 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PHOX2BQ99453 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC16.49■□□□□ 0.23
PHOX2BQ99453 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PHOX2BQ99453 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PHOX2BQ99453 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
PHOX2BQ99453 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PHOX2BQ99453 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC16.49■□□□□ 0.23
PHOX2BQ99453 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PHOX2BQ99453 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.49■□□□□ 0.23
PHOX2BQ99453 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.49■□□□□ 0.23
PHOX2BQ99453 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.49■□□□□ 0.23
PHOX2BQ99453 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.49■□□□□ 0.23
PHOX2BQ99453 AC073389.1-201ENST00000595595 795 ntBASIC16.49■□□□□ 0.23
PHOX2BQ99453 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.49■□□□□ 0.23
PHOX2BQ99453 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.49■□□□□ 0.23
PHOX2BQ99453 MIR8072-201ENST00000614241 80 ntBASIC16.49■□□□□ 0.23
PHOX2BQ99453 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.49■□□□□ 0.23
PHOX2BQ99453 AC009542.2-202ENST00000619004 1067 ntBASIC16.49■□□□□ 0.23
PHOX2BQ99453 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.49■□□□□ 0.23
PHOX2BQ99453 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PHOX2BQ99453 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PHOX2BQ99453 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PHOX2BQ99453 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PHOX2BQ99453 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PHOX2BQ99453 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
PHOX2BQ99453 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PHOX2BQ99453 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PHOX2BQ99453 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PHOX2BQ99453 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.48■□□□□ 0.23
PHOX2BQ99453 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PHOX2BQ99453 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PHOX2BQ99453 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PHOX2BQ99453 PP12613-201ENST00000424958 2230 ntBASIC16.48■□□□□ 0.23
PHOX2BQ99453 AC091046.1-201ENST00000331871 207 ntBASIC16.48■□□□□ 0.23
PHOX2BQ99453 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PHOX2BQ99453 NUS1P3-201ENST00000423502 862 ntBASIC16.48■□□□□ 0.23
PHOX2BQ99453 RPL13AP20-201ENST00000459725 609 ntBASIC16.48■□□□□ 0.23
PHOX2BQ99453 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC16.48■□□□□ 0.23
PHOX2BQ99453 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.48■□□□□ 0.23
PHOX2BQ99453 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC16.48■□□□□ 0.23
PHOX2BQ99453 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.48■□□□□ 0.23
PHOX2BQ99453 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.48■□□□□ 0.23
PHOX2BQ99453 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.48■□□□□ 0.23
PHOX2BQ99453 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.48■□□□□ 0.23
PHOX2BQ99453 PIGL-212ENST00000581006 554 ntTSL 4 BASIC16.48■□□□□ 0.23
PHOX2BQ99453 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PHOX2BQ99453 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PHOX2BQ99453 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.48■□□□□ 0.23
PHOX2BQ99453 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.48■□□□□ 0.23
PHOX2BQ99453 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
PHOX2BQ99453 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PHOX2BQ99453 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PHOX2BQ99453 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PHOX2BQ99453 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.48■□□□□ 0.23
PHOX2BQ99453 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.48■□□□□ 0.23
PHOX2BQ99453 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PHOX2BQ99453 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PHOX2BQ99453 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PHOX2BQ99453 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.48■□□□□ 0.23
PHOX2BQ99453 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PHOX2BQ99453 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.48■□□□□ 0.23
PHOX2BQ99453 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.48■□□□□ 0.23
PHOX2BQ99453 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.47■□□□□ 0.23
PHOX2BQ99453 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms