Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
GAFA1Q96PS6 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
GAFA1Q96PS6 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GAFA1Q96PS6 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GAFA1Q96PS6 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GAFA1Q96PS6 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GAFA1Q96PS6 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GAFA1Q96PS6 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GAFA1Q96PS6 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
GAFA1Q96PS6 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GAFA1Q96PS6 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GAFA1Q96PS6 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
GAFA1Q96PS6 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.53□□□□□ -0.24
GAFA1Q96PS6 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GAFA1Q96PS6 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
GAFA1Q96PS6 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.53□□□□□ -0.24
GAFA1Q96PS6 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GAFA1Q96PS6 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GAFA1Q96PS6 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GAFA1Q96PS6 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
GAFA1Q96PS6 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GAFA1Q96PS6 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
GAFA1Q96PS6 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.53□□□□□ -0.24
GAFA1Q96PS6 SPDYE14P-201ENST00000442619 822 ntBASIC13.53□□□□□ -0.24
GAFA1Q96PS6 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.53□□□□□ -0.24
GAFA1Q96PS6 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC13.53□□□□□ -0.24
GAFA1Q96PS6 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.53□□□□□ -0.24
GAFA1Q96PS6 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GAFA1Q96PS6 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GAFA1Q96PS6 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GAFA1Q96PS6 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
GAFA1Q96PS6 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.53□□□□□ -0.24
GAFA1Q96PS6 AC026150.2-201ENST00000564693 1156 ntBASIC13.53□□□□□ -0.24
GAFA1Q96PS6 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC13.53□□□□□ -0.24
GAFA1Q96PS6 GPALPP1-207ENST00000611650 899 ntBASIC13.53□□□□□ -0.24
GAFA1Q96PS6 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.53□□□□□ -0.24
GAFA1Q96PS6 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
GAFA1Q96PS6 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GAFA1Q96PS6 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC13.53□□□□□ -0.24
GAFA1Q96PS6 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
GAFA1Q96PS6 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
GAFA1Q96PS6 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
GAFA1Q96PS6 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
GAFA1Q96PS6 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC13.53□□□□□ -0.24
GAFA1Q96PS6 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
GAFA1Q96PS6 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
GAFA1Q96PS6 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
GAFA1Q96PS6 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.52□□□□□ -0.24
GAFA1Q96PS6 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC13.52□□□□□ -0.24
GAFA1Q96PS6 BLK-205ENST00000529894 2017 ntTSL 5 BASIC13.52□□□□□ -0.24
GAFA1Q96PS6 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
GAFA1Q96PS6 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.24
GAFA1Q96PS6 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
GAFA1Q96PS6 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
GAFA1Q96PS6 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
GAFA1Q96PS6 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
GAFA1Q96PS6 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
GAFA1Q96PS6 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
GAFA1Q96PS6 HAUS4P1-201ENST00000406739 1145 ntBASIC13.52□□□□□ -0.25
GAFA1Q96PS6 TSEN15P1-201ENST00000423257 515 ntBASIC13.52□□□□□ -0.25
GAFA1Q96PS6 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.52□□□□□ -0.25
GAFA1Q96PS6 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.52□□□□□ -0.25
GAFA1Q96PS6 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.52□□□□□ -0.25
GAFA1Q96PS6 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
GAFA1Q96PS6 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.52□□□□□ -0.25
GAFA1Q96PS6 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
GAFA1Q96PS6 LINC00628-201ENST00000628516 1289 ntBASIC13.52□□□□□ -0.25
GAFA1Q96PS6 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
GAFA1Q96PS6 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
GAFA1Q96PS6 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
GAFA1Q96PS6 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
GAFA1Q96PS6 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
GAFA1Q96PS6 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.52□□□□□ -0.25
GAFA1Q96PS6 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
GAFA1Q96PS6 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
GAFA1Q96PS6 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
GAFA1Q96PS6 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
GAFA1Q96PS6 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
GAFA1Q96PS6 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
GAFA1Q96PS6 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
GAFA1Q96PS6 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
GAFA1Q96PS6 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
GAFA1Q96PS6 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
GAFA1Q96PS6 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC13.52□□□□□ -0.25
GAFA1Q96PS6 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
GAFA1Q96PS6 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
GAFA1Q96PS6 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms