Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 KLF4P1-201ENST00000412782 1185 ntBASIC12.4□□□□□ -0.42
AP1S3Q96PC3 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 HOMER2P1-201ENST00000455653 964 ntBASIC12.4□□□□□ -0.42
AP1S3Q96PC3 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 DUT-205ENST00000558813 769 ntTSL 2 BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
AP1S3Q96PC3 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC12.4□□□□□ -0.43
AP1S3Q96PC3 R3HDM2P2-201ENST00000401880 2116 ntBASIC12.4□□□□□ -0.43
AP1S3Q96PC3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
AP1S3Q96PC3 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
AP1S3Q96PC3 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
AP1S3Q96PC3 LGALS8-AS1-201ENST00000487567 1457 ntBASIC12.4□□□□□ -0.43
AP1S3Q96PC3 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.4□□□□□ -0.43
AP1S3Q96PC3 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
AP1S3Q96PC3 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC12.4□□□□□ -0.43
AP1S3Q96PC3 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC12.4□□□□□ -0.43
AP1S3Q96PC3 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.43
AP1S3Q96PC3 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
AP1S3Q96PC3 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
AP1S3Q96PC3 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
AP1S3Q96PC3 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
AP1S3Q96PC3 UBC-206ENST00000538617 1303 ntTSL 5 BASIC12.39□□□□□ -0.43
AP1S3Q96PC3 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC12.39□□□□□ -0.43
AP1S3Q96PC3 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
AP1S3Q96PC3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC12.39□□□□□ -0.43
AP1S3Q96PC3 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
AP1S3Q96PC3 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
AP1S3Q96PC3 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
AP1S3Q96PC3 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC12.39□□□□□ -0.43
AP1S3Q96PC3 AC125634.1-201ENST00000438758 1403 ntBASIC12.39□□□□□ -0.43
AP1S3Q96PC3 KRT8P10-201ENST00000450021 1447 ntBASIC12.39□□□□□ -0.43
AP1S3Q96PC3 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
AP1S3Q96PC3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
AP1S3Q96PC3 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
AP1S3Q96PC3 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
AP1S3Q96PC3 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
AP1S3Q96PC3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC12.39□□□□□ -0.43
AP1S3Q96PC3 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
AP1S3Q96PC3 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC12.39□□□□□ -0.43
AP1S3Q96PC3 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
AP1S3Q96PC3 HBZP1-201ENST00000354915 429 ntBASIC12.39□□□□□ -0.43
AP1S3Q96PC3 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
AP1S3Q96PC3 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC12.39□□□□□ -0.43
AP1S3Q96PC3 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
AP1S3Q96PC3 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
AP1S3Q96PC3 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
AP1S3Q96PC3 SNX5-210ENST00000481323 562 ntTSL 3 BASIC12.39□□□□□ -0.43
AP1S3Q96PC3 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
AP1S3Q96PC3 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
AP1S3Q96PC3 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC12.39□□□□□ -0.43
AP1S3Q96PC3 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC12.39□□□□□ -0.43
AP1S3Q96PC3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
AP1S3Q96PC3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC12.39□□□□□ -0.43
AP1S3Q96PC3 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC12.39□□□□□ -0.43
AP1S3Q96PC3 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
AP1S3Q96PC3 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
AP1S3Q96PC3 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.39□□□□□ -0.43
AP1S3Q96PC3 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
AP1S3Q96PC3 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
AP1S3Q96PC3 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
AP1S3Q96PC3 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC12.39□□□□□ -0.43
AP1S3Q96PC3 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC12.39□□□□□ -0.43
AP1S3Q96PC3 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
AP1S3Q96PC3 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
AP1S3Q96PC3 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms