Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.62□□□□□ -0.39
UBE2E2Q96LR5 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC12.62□□□□□ -0.39
UBE2E2Q96LR5 LITAF-210ENST00000571976 548 ntTSL 2 BASIC12.62□□□□□ -0.39
UBE2E2Q96LR5 LITAF-214ENST00000574703 486 ntTSL 2 BASIC12.62□□□□□ -0.39
UBE2E2Q96LR5 AC061975.2-201ENST00000581722 295 ntBASIC12.62□□□□□ -0.39
UBE2E2Q96LR5 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC12.62□□□□□ -0.39
UBE2E2Q96LR5 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
UBE2E2Q96LR5 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2E2Q96LR5 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2E2Q96LR5 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
UBE2E2Q96LR5 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2E2Q96LR5 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC12.62□□□□□ -0.39
UBE2E2Q96LR5 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC12.62□□□□□ -0.39
UBE2E2Q96LR5 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2E2Q96LR5 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
UBE2E2Q96LR5 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2E2Q96LR5 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2E2Q96LR5 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC12.62□□□□□ -0.39
UBE2E2Q96LR5 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC12.62□□□□□ -0.39
UBE2E2Q96LR5 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2E2Q96LR5 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2E2Q96LR5 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2E2Q96LR5 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
UBE2E2Q96LR5 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC12.62□□□□□ -0.39
UBE2E2Q96LR5 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC12.61□□□□□ -0.39
UBE2E2Q96LR5 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC12.61□□□□□ -0.39
UBE2E2Q96LR5 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2E2Q96LR5 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC12.61□□□□□ -0.39
UBE2E2Q96LR5 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC12.61□□□□□ -0.39
UBE2E2Q96LR5 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2E2Q96LR5 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2E2Q96LR5 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
UBE2E2Q96LR5 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2E2Q96LR5 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2E2Q96LR5 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2E2Q96LR5 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2E2Q96LR5 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC12.61□□□□□ -0.39
UBE2E2Q96LR5 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2E2Q96LR5 PPP6R2P1-201ENST00000450880 1275 ntBASIC12.61□□□□□ -0.39
UBE2E2Q96LR5 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC12.61□□□□□ -0.39
UBE2E2Q96LR5 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
UBE2E2Q96LR5 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC12.61□□□□□ -0.39
UBE2E2Q96LR5 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC12.61□□□□□ -0.39
UBE2E2Q96LR5 DUX4L27-201ENST00000554796 1261 ntBASIC12.61□□□□□ -0.39
UBE2E2Q96LR5 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC12.61□□□□□ -0.39
UBE2E2Q96LR5 MIR4321-201ENST00000592276 80 ntBASIC12.61□□□□□ -0.39
UBE2E2Q96LR5 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC12.61□□□□□ -0.39
UBE2E2Q96LR5 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2E2Q96LR5 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC12.61□□□□□ -0.39
UBE2E2Q96LR5 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
UBE2E2Q96LR5 AL592424.1-201ENST00000563624 1536 ntBASIC12.61□□□□□ -0.39
UBE2E2Q96LR5 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2E2Q96LR5 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC12.61□□□□□ -0.39
UBE2E2Q96LR5 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC12.61□□□□□ -0.39
UBE2E2Q96LR5 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2E2Q96LR5 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2E2Q96LR5 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2E2Q96LR5 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC12.61□□□□□ -0.39
UBE2E2Q96LR5 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
UBE2E2Q96LR5 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC12.61□□□□□ -0.39
UBE2E2Q96LR5 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
UBE2E2Q96LR5 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2E2Q96LR5 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2E2Q96LR5 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2E2Q96LR5 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2E2Q96LR5 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
UBE2E2Q96LR5 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2E2Q96LR5 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2E2Q96LR5 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2E2Q96LR5 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC12.6□□□□□ -0.39
UBE2E2Q96LR5 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2E2Q96LR5 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2E2Q96LR5 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2E2Q96LR5 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2E2Q96LR5 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2E2Q96LR5 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2E2Q96LR5 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2E2Q96LR5 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2E2Q96LR5 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC12.6□□□□□ -0.39
UBE2E2Q96LR5 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2E2Q96LR5 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2E2Q96LR5 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2E2Q96LR5 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
UBE2E2Q96LR5 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2E2Q96LR5 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC12.6□□□□□ -0.39
UBE2E2Q96LR5 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2E2Q96LR5 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2E2Q96LR5 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC12.6□□□□□ -0.39
UBE2E2Q96LR5 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC12.6□□□□□ -0.39
UBE2E2Q96LR5 BASP1P1-201ENST00000430708 665 ntBASIC12.6□□□□□ -0.39
UBE2E2Q96LR5 AC055876.3-201ENST00000431496 288 ntBASIC12.6□□□□□ -0.39
UBE2E2Q96LR5 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2E2Q96LR5 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC12.6□□□□□ -0.39
UBE2E2Q96LR5 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12.6□□□□□ -0.39
UBE2E2Q96LR5 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
UBE2E2Q96LR5 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC12.6□□□□□ -0.39
UBE2E2Q96LR5 DUT-210ENST00000559935 569 ntTSL 3 BASIC12.6□□□□□ -0.39
UBE2E2Q96LR5 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC12.6□□□□□ -0.39
UBE2E2Q96LR5 AC105021.1-202ENST00000570572 669 ntBASIC12.6□□□□□ -0.39
UBE2E2Q96LR5 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms