Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC18.93■□□□□ 0.62
CHAMP1Q96JM3 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHAMP1Q96JM3 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC18.93■□□□□ 0.62
CHAMP1Q96JM3 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHAMP1Q96JM3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.93■□□□□ 0.62
CHAMP1Q96JM3 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHAMP1Q96JM3 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHAMP1Q96JM3 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.92■□□□□ 0.62
CHAMP1Q96JM3 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHAMP1Q96JM3 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHAMP1Q96JM3 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHAMP1Q96JM3 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHAMP1Q96JM3 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHAMP1Q96JM3 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHAMP1Q96JM3 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHAMP1Q96JM3 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHAMP1Q96JM3 AC138035.3-201ENST00000622706 2791 ntBASIC18.92■□□□□ 0.62
CHAMP1Q96JM3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHAMP1Q96JM3 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHAMP1Q96JM3 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHAMP1Q96JM3 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CHAMP1Q96JM3 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.92■□□□□ 0.62
CHAMP1Q96JM3 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CHAMP1Q96JM3 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.92■□□□□ 0.62
CHAMP1Q96JM3 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.92■□□□□ 0.62
CHAMP1Q96JM3 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.92■□□□□ 0.62
CHAMP1Q96JM3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.92■□□□□ 0.62
CHAMP1Q96JM3 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.92■□□□□ 0.62
CHAMP1Q96JM3 AC148477.8-201ENST00000624298 468 ntBASIC18.92■□□□□ 0.62
CHAMP1Q96JM3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.92■□□□□ 0.62
CHAMP1Q96JM3 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHAMP1Q96JM3 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHAMP1Q96JM3 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC18.92■□□□□ 0.62
CHAMP1Q96JM3 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHAMP1Q96JM3 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC18.92■□□□□ 0.62
CHAMP1Q96JM3 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.92■□□□□ 0.62
CHAMP1Q96JM3 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CHAMP1Q96JM3 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CHAMP1Q96JM3 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC18.92■□□□□ 0.62
CHAMP1Q96JM3 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHAMP1Q96JM3 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC18.91■□□□□ 0.62
CHAMP1Q96JM3 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHAMP1Q96JM3 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.91■□□□□ 0.62
CHAMP1Q96JM3 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHAMP1Q96JM3 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHAMP1Q96JM3 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHAMP1Q96JM3 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHAMP1Q96JM3 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHAMP1Q96JM3 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHAMP1Q96JM3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.91■□□□□ 0.62
CHAMP1Q96JM3 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CHAMP1Q96JM3 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHAMP1Q96JM3 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.91■□□□□ 0.62
CHAMP1Q96JM3 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHAMP1Q96JM3 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.91■□□□□ 0.62
CHAMP1Q96JM3 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.91■□□□□ 0.62
CHAMP1Q96JM3 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.91■□□□□ 0.62
CHAMP1Q96JM3 AC005412.3-201ENST00000580309 715 ntBASIC18.91■□□□□ 0.62
CHAMP1Q96JM3 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHAMP1Q96JM3 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHAMP1Q96JM3 DKFZP434H168-201ENST00000567381 1905 ntBASIC18.91■□□□□ 0.62
CHAMP1Q96JM3 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHAMP1Q96JM3 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CHAMP1Q96JM3 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHAMP1Q96JM3 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.91■□□□□ 0.62
CHAMP1Q96JM3 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.91■□□□□ 0.62
CHAMP1Q96JM3 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHAMP1Q96JM3 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.91■□□□□ 0.62
CHAMP1Q96JM3 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHAMP1Q96JM3 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHAMP1Q96JM3 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHAMP1Q96JM3 AC092127.1-201ENST00000567093 3455 ntBASIC18.91■□□□□ 0.62
CHAMP1Q96JM3 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
CHAMP1Q96JM3 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHAMP1Q96JM3 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CHAMP1Q96JM3 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHAMP1Q96JM3 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
CHAMP1Q96JM3 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CHAMP1Q96JM3 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.91■□□□□ 0.62
CHAMP1Q96JM3 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC18.91■□□□□ 0.62
CHAMP1Q96JM3 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CHAMP1Q96JM3 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CHAMP1Q96JM3 AC006486.2-201ENST00000624246 2199 ntBASIC18.91■□□□□ 0.62
CHAMP1Q96JM3 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC18.9■□□□□ 0.62
CHAMP1Q96JM3 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.9■□□□□ 0.62
CHAMP1Q96JM3 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHAMP1Q96JM3 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CHAMP1Q96JM3 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.9■□□□□ 0.62
CHAMP1Q96JM3 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.9■□□□□ 0.62
CHAMP1Q96JM3 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHAMP1Q96JM3 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CHAMP1Q96JM3 CELP-203ENST00000624767 2414 ntTSL 5 BASIC18.9■□□□□ 0.62
CHAMP1Q96JM3 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHAMP1Q96JM3 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CHAMP1Q96JM3 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC18.9■□□□□ 0.62
CHAMP1Q96JM3 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHAMP1Q96JM3 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.9■□□□□ 0.62
CHAMP1Q96JM3 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CHAMP1Q96JM3 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.9■□□□□ 0.62
CHAMP1Q96JM3 KRT18P13-201ENST00000400056 1290 ntBASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms