Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.61■□□□□ 0.41
PGBD4Q96DM1 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC17.61■□□□□ 0.41
PGBD4Q96DM1 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PGBD4Q96DM1 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.61■□□□□ 0.41
PGBD4Q96DM1 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PGBD4Q96DM1 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PGBD4Q96DM1 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
PGBD4Q96DM1 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC17.61■□□□□ 0.41
PGBD4Q96DM1 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PGBD4Q96DM1 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.61■□□□□ 0.41
PGBD4Q96DM1 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PGBD4Q96DM1 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PGBD4Q96DM1 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PGBD4Q96DM1 AC106886.4-201ENST00000623557 2502 ntBASIC17.6■□□□□ 0.41
PGBD4Q96DM1 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PGBD4Q96DM1 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.6■□□□□ 0.41
PGBD4Q96DM1 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PGBD4Q96DM1 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PGBD4Q96DM1 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.6■□□□□ 0.41
PGBD4Q96DM1 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PGBD4Q96DM1 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
PGBD4Q96DM1 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PGBD4Q96DM1 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PGBD4Q96DM1 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.6■□□□□ 0.41
PGBD4Q96DM1 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PGBD4Q96DM1 AP005018.1-201ENST00000525475 301 ntBASIC17.6■□□□□ 0.41
PGBD4Q96DM1 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.6■□□□□ 0.41
PGBD4Q96DM1 AC010336.2-201ENST00000564226 506 ntBASIC17.6■□□□□ 0.41
PGBD4Q96DM1 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
PGBD4Q96DM1 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PGBD4Q96DM1 AC025048.6-201ENST00000634326 1161 ntBASIC17.6■□□□□ 0.41
PGBD4Q96DM1 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC17.6■□□□□ 0.41
PGBD4Q96DM1 AC004840.1-201ENST00000636359 365 ntBASIC17.6■□□□□ 0.41
PGBD4Q96DM1 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.6■□□□□ 0.41
PGBD4Q96DM1 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC17.6■□□□□ 0.41
PGBD4Q96DM1 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PGBD4Q96DM1 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PGBD4Q96DM1 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.6■□□□□ 0.41
PGBD4Q96DM1 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PGBD4Q96DM1 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PGBD4Q96DM1 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PGBD4Q96DM1 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
PGBD4Q96DM1 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PGBD4Q96DM1 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PGBD4Q96DM1 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PGBD4Q96DM1 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
PGBD4Q96DM1 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PGBD4Q96DM1 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.6■□□□□ 0.41
PGBD4Q96DM1 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PGBD4Q96DM1 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
PGBD4Q96DM1 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PGBD4Q96DM1 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
PGBD4Q96DM1 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.59■□□□□ 0.41
PGBD4Q96DM1 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PGBD4Q96DM1 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PGBD4Q96DM1 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.59■□□□□ 0.41
PGBD4Q96DM1 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PGBD4Q96DM1 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PGBD4Q96DM1 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PGBD4Q96DM1 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
PGBD4Q96DM1 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC17.59■□□□□ 0.41
PGBD4Q96DM1 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC17.59■□□□□ 0.41
PGBD4Q96DM1 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.59■□□□□ 0.41
PGBD4Q96DM1 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.59■□□□□ 0.41
PGBD4Q96DM1 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.59■□□□□ 0.41
PGBD4Q96DM1 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC17.59■□□□□ 0.41
PGBD4Q96DM1 TMPRSS11CP-201ENST00000453277 683 ntBASIC17.59■□□□□ 0.41
PGBD4Q96DM1 AL512361.1-201ENST00000554200 418 ntBASIC17.59■□□□□ 0.41
PGBD4Q96DM1 PAM16-215ENST00000577031 548 ntTSL 4 BASIC17.59■□□□□ 0.41
PGBD4Q96DM1 MIR4321-201ENST00000592276 80 ntBASIC17.59■□□□□ 0.41
PGBD4Q96DM1 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.59■□□□□ 0.41
PGBD4Q96DM1 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.59■□□□□ 0.41
PGBD4Q96DM1 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.59■□□□□ 0.41
PGBD4Q96DM1 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.59■□□□□ 0.41
PGBD4Q96DM1 MIR6069-201ENST00000620069 79 ntBASIC17.59■□□□□ 0.41
PGBD4Q96DM1 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.59■□□□□ 0.41
PGBD4Q96DM1 AL033527.5-202ENST00000641632 1098 ntBASIC17.59■□□□□ 0.41
PGBD4Q96DM1 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
PGBD4Q96DM1 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PGBD4Q96DM1 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
PGBD4Q96DM1 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.59■□□□□ 0.41
PGBD4Q96DM1 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PGBD4Q96DM1 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.59■□□□□ 0.41
PGBD4Q96DM1 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
PGBD4Q96DM1 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
PGBD4Q96DM1 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.58■□□□□ 0.41
PGBD4Q96DM1 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
PGBD4Q96DM1 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
PGBD4Q96DM1 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PGBD4Q96DM1 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PGBD4Q96DM1 TNRC18P3-201ENST00000441896 2691 ntBASIC17.58■□□□□ 0.41
PGBD4Q96DM1 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.58■□□□□ 0.41
PGBD4Q96DM1 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PGBD4Q96DM1 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
PGBD4Q96DM1 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PGBD4Q96DM1 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC17.58■□□□□ 0.41
PGBD4Q96DM1 AC007541.1-201ENST00000570282 1469 ntBASIC17.58■□□□□ 0.41
PGBD4Q96DM1 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
PGBD4Q96DM1 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
PGBD4Q96DM1 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms